Evidence map›Paper›PMID 30612264›Full record

ArticleOrigins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life2018

Methanogenesis on Early Stages of Life: Ancient but Not Primordial.

Israel Muñoz-Velasco, Carlos García-Ferris, Ricardo Hernandez-Morales, Antonio Lazcano, Juli Peretó, Arturo Becerra

Abstract read
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In one paragraph

Article in Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Israel Muñoz-VelascoFacultad de Ciencias, Universidad Nacional Autónoma de México, Apdo. Postal 70-407 Cd. Universitaria, 04510, Ciudad de México, Mexico.
Carlos García-FerrisDepartament de Bioquímica i Biologia Molecular, Universitat de València, Apartat Postal 22085, 46071, València, Spain.
Ricardo Hernandez-MoralesFacultad de Ciencias, Universidad Nacional Autónoma de México, Apdo. Postal 70-407 Cd. Universitaria, 04510, Ciudad de México, Mexico.
Antonio LazcanoFacultad de Ciencias, Universidad Nacional Autónoma de México, Apdo. Postal 70-407 Cd. Universitaria, 04510, Ciudad de México, Mexico.
Juli PeretóDepartament de Bioquímica i Biologia Molecular, Universitat de València, Apartat Postal 22085, 46071, València, Spain.
Arturo BecerraFacultad de Ciencias, Universidad Nacional Autónoma de México, Apdo. Postal 70-407 Cd. Universitaria, 04510, Ciudad de México, Mexico. abb@ciencias.unam.mx.ORCID http://orcid.org/0000-0002-7076-0342
Universidad Nacional Autónoma de México · MXUniversitat de València · ESColegio de Postgraduados · MXEl Colegio de México · MX

Funding

Consejo Nacional de Ciencia y Tecnología fellowship 415961Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México PAPIIT-IN223916Generalitat Valenciana PROMETEOII/2014/065Mineco/FEDER BFU2015-64322-C2-1-R and BIO2015-66960-C3-1-R
6 · The paper itself

Abstract

Of the six known autotrophic pathways, the Wood-Ljungdahl pathway (WL) is the only one present in both the acetate producing Bacteria (homoacetogens) and the methane producing Archaea (hydrogenotrophic methanogens), and it has been suggested that WL is one of the oldest metabolic pathways. However, only the so-called carbonyl branch is shared by Archaea and Bacteria, while the methyl branch is different, both in the number of reactions and enzymes, which are not homologous among them. In this work we show that some parts of the methyl branch of archaeal Wood-Ljungdahl pathway (MBWL) are present in bacteria as well as in non-methanogen archaea, although the tangled evolutionary history of MBWL cannot be traced back to the Last Common Ancestor. We have also analyzed the different variants of methanogenesis (hydrogenotrophic, acetoclastic and methylotrophic pathways), and concluded that each of these pathways, and every different enzyme or subunit (in the case of multimeric enzymes), has their own intricate evolutionary history. Our study supports the scenario of hydrogenotrophic methanogenesis being older than the other variants, albeit not old enough to be present in the last archaeal common ancestor.

Indexed as

Metabolic Networks and PathwaysOrigin of LifeArchaeaBacteriaEvolution, MolecularMethaneMethaneArchaeaLast common ancestor (LCA)MethanogenesisMethanogenic coenzymesWood-Ljungdahl pathway

Identifiers

PMID30612264
OpenAlexW2907018287

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.