Evidence map›Paper›PMID 30611834›Full record

ArticleFungal genetics and biology : FG & B2019

Mating type (MAT) locus and possible sexuality of the opportunistic pathogen Exophiala dermatitidis.

Banu Metin, Aylin Döğen, Esra Yıldırım, G Sybren de Hoog, Joseph Heitman, Macit Ilkit

Abstract read
In one paragraph

Article in Fungal genetics and biology : FG & B, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Description of new micro-colonial fungi speciesbioRxiv : the preprint server for biology · 2024
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 3 countries.

Banu MetinDepartment of Food Engineering, Faculty of Engineering and Natural Sciences, Istanbul Sabahattin Zaim University, Istanbul, Turkey. Electronic address: banu.metin@izu.edu.tr.
Aylin DöğenDepartment of Pharmaceutical Microbiology, Faculty of Pharmacy, Mersin University, Mersin, Turkey. Electronic address: aylinats@mersin.edu.tr.
Esra YıldırımDepartment of Food Engineering, Faculty of Engineering and Natural Sciences, Istanbul Sabahattin Zaim University, Istanbul, Turkey. Electronic address: e.yildirim@izu.edu.tr.
G Sybren de HoogWesterdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; Center of Expertise in Mycology of Radboudumc/CWZ, Nijmegen, the Netherlands. Electronic address: s.hoog@westerdijkinstitute.nl.
Joseph HeitmanDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, USA. Electronic address: heitm001@duke.edu.
Macit IlkitDivision of Mycology, Department of Microbiology, Faculty of Medicine, Çukurova University, Adana, Turkey. Electronic address: milkit@cu.edu.tr.
İstanbul Sabahattin Zaim Üniversitesi · TRCukurova University · TRDuke University · USMersin Üniversitesi · TRRadboud University Nijmegen · NL

Funding

Structure, function, and evolution of the Cryptococcus MAT locusR01AI050113 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 2002 to 2024
$8.5M
ROLE OF CALCINEURIN IN C. NEOFORMANS MATING AND FRUITINGR01AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 1997 to 2025
$6.7M
Genetics of Cryptococcus sexual reproductionR37AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 2011 to 2020
$4.9M
NIAID NIH HHS R01 AI039115NIAID NIH HHS R01 AI050113NIAID NIH HHS R37 AI039115
6 · The paper itself

Abstract

Sexual reproduction among the black yeasts is generally limited to environmental saprobic species and is rarely observed among opportunists in humans. To date, a complete sexual cycle has not been observed in Exophiala dermatitidis. In this study, we aimed to gain insight into the reproductive mode of E. dermatitidis by characterizing its mating type (MAT) locus, conducting MAT screening of environmental and clinical isolates, examining the expression of the MAT genes and analyzing the virulence of the isolates of different mating types. Similar to other members of the Pezizomycotina, the E. dermatitidis genome harbors a high mobility group (HMG) domain gene (MAT1-2-1) in the vicinity of the SLA2 and APN2 genes. The MAT loci of 74 E. dermatitidis isolates (11 clinical and 63 environmental) were screened by PCR, and the surrounding region was amplified using long-range PCR. Sequencing of the ∼ 12-kb PCR product of a MAT1-1 isolate revealed an α-box gene (MAT1-1-1). The MAT1-1 idiomorph was 3544-bp long and harbored the MAT1-1-1 and MAT1-1-4 genes. The MAT1-2 idiomorph was longer, 3771-bp, and harbored only the MAT1-2-1 gene. This structure suggests a heterothallic reproduction mode. The distribution of MAT among 74 isolates was ∼ 1:1 with a MAT1-1:MAT1-2 ratio of 35:39. RT-PCR analysis indicated that the MAT genes are transcribed. No significant difference was detected in the virulence of isolates representing different mating types using a Galleria mellonella model (P > 0.05). Collectively, E. dermatitidis is the first opportunistic black yeast in which both MAT idiomorphs have been characterized. The occurrence of isolates bearing both idiomorphs, their approximately equal distribution, and the expression of the MAT genes suggest that E. dermatitidis might reproduce sexually.

Indexed as

Genes, Mating Type, FungalExophialaGene AmplificationHumansPhaeohyphomycosisPolymerase Chain ReactionRNA, FungalTranscription, GeneticVirulenceRNA, FungalBlack yeastsChaetothyrialesEcologyGalleria mellonellaSexual reproductionVirulence

Identifiers

PMID30611834
PMCPMC6417501
OpenAlexW2908124537

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.