Evidence map›Paper›PMID 30609410›Full record

ArticleAmerican journal of human genetics2019

Mutations in NCAPG2 Cause a Severe Neurodevelopmental Syndrome that Expands the Phenotypic Spectrum of Condensinopathies.

Tahir N Khan, Kamal Khan, Azita Sadeghpour, Hannah Reynolds, Yezmin Perilla, Marie T McDonald, William B Gallentine, Shahid M Baig, Task Force for Neonatal Genomics, Erica E Davis and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Common and rare variant genetic contributions in African Americans with autism.medRxiv : the preprint server for health sciences · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. International journal of molecular sciences · 2023
    Article
  17. Article
  18. Cancers · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Tahir N KhanCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA.
Kamal KhanCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA; Human Molecular Genetics Laboratory, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan.
Azita SadeghpourCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA.
Hannah ReynoldsCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA; Furman University, Greenville, SC 29613, USA.
Yezmin PerillaCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA.
Marie T McDonaldDepartment of Pediatrics, Division of Medical Genetics, Duke University Medical Center, Durham, NC 27710, USA.
William B GallentineDepartment of Pediatrics, Division of Pediatric Neurology, Duke University Medical Center, Durham, NC 27710, USA.
Shahid M BaigHuman Molecular Genetics Laboratory, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan.
Task Force for Neonatal Genomics
Erica E DavisCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA. Electronic address: erica.davis@duke.edu.
Nicholas KatsanisCenter for Human Disease Modeling, Duke University, Durham, NC 27701, USA. Electronic address: nicholas.katsanis@duke.edu.
Duke University · USDuke Medical Center · USNational Institute for Biotechnology and Genetic Engineering · PK

Funding

Molecular Genetics of BBSR01HD042601 · NICHD · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2003 to 2023
$8.2M
Genetic and Functional Studies of Human Ciliary SyndromesR01DK072301 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2005 to 2022
$7.2M
Renal Genomics CoreP30DK096493 · NIDDK · DUKE UNIVERSITY · PI WINN, MICHELLE P. · 2012 to 2016
$5.9M
Functional Dissection of CNVs in Neurodevelopmental TraitsR01MH106826 · NIMH · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2015 to 2025
$4.6M
Research Project 3P50DK096415 · NIDDK · DUKE UNIVERSITY · PI KATSANIS, NICHOLAS · 2012 to 2016
$4.2M
The Role of Basa Bodies in Wnt SignalingR01DK075972 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI KATSANIS, NICHOLAS · 2007 to 2015
$3.1M
NICHD NIH HHS R01 HD042601NIDDK NIH HHS P30 DK096493NIDDK NIH HHS P50 DK096415NIDDK NIH HHS R01 DK072301NIDDK NIH HHS R01 DK075972NIMH NIH HHS R01 MH106826
6 · The paper itself

Abstract

The use of whole-exome and whole-genome sequencing has been a catalyst for a genotype-first approach to diagnostics. Under this paradigm, we have implemented systematic sequencing of neonates and young children with a suspected genetic disorder. Here, we report on two families with recessive mutations in NCAPG2 and overlapping clinical phenotypes that include severe neurodevelopmental defects, failure to thrive, ocular abnormalities, and defects in urogenital and limb morphogenesis. NCAPG2 encodes a member of the condensin II complex, necessary for the condensation of chromosomes prior to cell division. Consistent with a causal role for NCAPG2, we found abnormal chromosome condensation, augmented anaphase chromatin-bridge formation, and micronuclei in daughter cells of proband skin fibroblasts. To test the functional relevance of the discovered variants, we generated an ncapg2 zebrafish model. Morphants displayed clinically relevant phenotypes, such as renal anomalies, microcephaly, and concomitant increases in apoptosis and altered mitotic progression. These could be rescued by wild-type but not mutant human NCAPG2 mRNA and were recapitulated in CRISPR-Cas9 F0 mutants. Finally, we noted that the individual with a complex urogenital defect also harbored a heterozygous NPHP1 deletion, a common contributor to nephronophthisis. To test whether sensitization at the NPHP1 locus might contribute to a more severe renal phenotype, we co-suppressed nphp1 and ncapg2, which resulted in significantly more dysplastic renal tubules in zebrafish larvae. Together, our data suggest that impaired function of NCAPG2 results in a severe condensinopathy, and they highlight the potential utility of examining candidate pathogenic lesions beyond the primary disease locus.

Indexed as

MutationPhenotypeAbnormalities, MultipleAdaptor Proteins, Signal TransducingAdenosine TriphosphatasesAnimalsChildChild, PreschoolChromosomal Proteins, Non-HistoneCytoskeletal ProteinsDNA-Binding ProteinsFemaleHumansInfantInfant, NewbornMaleAdaptor Proteins, Signal TransducingAdenosine TriphosphatasesChromosomal Proteins, Non-Histonecondensin complexesCytoskeletal ProteinsDNA-Binding ProteinsMembrane ProteinsMultiprotein ComplexesNCAPG2 protein, humanncapg2 protein, zebrafishNPHP1 protein, humannphp1 protein, zebrafishZebrafish Proteinscell cycle delaychromosome condensationgenetic interactionmicrocephalymicronucleiNCAPD3NCAPH2NPHP1renal cystzebrafish

Identifiers

PMID30609410
PMCPMC6323578
OpenAlexW2906952882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.