Evidence map›Paper›PMID 30607077›Full record

ArticleEthiopian journal of health sciences2018

Effect of Conventional and Microwave Tissue Processing Technique on DNA Integrity: A Comparative Molecular Analysis.

Dhara Dwivedi, Sowmya Kasetty, Manisha S Tijare, Shreenivas Kallianpur, Nitin Prabhakar, Raju T Ragavendra, Ami Desai

Open access · diamondAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Ethiopian journal of health sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 62% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Dhara DwivediDepartment of Oral Pathology Dentistry Unit, Ayder Referral Hospital-College of Health Sciences Mekelle University, Ethiopia.
Sowmya KasettyOral pathology Division, Oral Basic and Clinical Sciences, College of Dentistry, Qassim Private College, Buraidah, KSA.
Manisha S TijareDr. R R Kambe Dental College and Hospital, Ankola, India.
Shreenivas KallianpurPeople's College of Dental Sciences and Research Centre.
Nitin PrabhakarDept of Oral Maxillofacial Surgery, Ayder Referral Hospital-College of Health Sciences, Mekelle University, Ethiopia.
Raju T RagavendraOral pathology Division, Oral Basic and Clinical Sciences, College of Dentistry, Qassim Private College, Buraidah, KSA.
Ami DesaiPeople's College of Dental Sciences and Research Centre, Bhopal, Madhya Pradesh, India.
Mekelle University · ETPeople’s University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMethods of diagnostic molecular biology are routinely applied on formalin-fixed, paraffin-embedded tissues processed via conventional method. Recently, there has been a growing interest to use microwave technology in histopathology laboratories to overcome the deficiencies of the conventional processing method. Thefore, this study was aimed to compare and analyze the quality and quantity of DNA obtained from tissues processed by conventional and microwave tissue processing techniques and to further ascertain the applicability of the latter for PCR (polymerase chain reaction based research).

methodsThirty fresh tissues of oral squamous cell carcinoma (OSCC) were included, and each sample was cut into two equivalent halves. One tissue half was processed by conventional manual method whereas the other half was processed using a domestic microwave oven. DNA was obtained from all the tissues which were then subjected to Polymerase chain reaction (PCR) to evaluate GAPDH (Glyceraldehyde-3-phosphate dehydrogenase) gene expression.

resultsThe results revealed better DNA yield from microwave processed tissue while the quality of the DNA was alike from both the techniques.

conclusionOn the basis of the results obtained, it can be concluded that DNA produced by microwave processed tissues was similar to that obtained by conventional processing technique in terms of quantity and quality. Thus, microwave processed tissue samples can be successfully used for further molecular studies and researches.

Indexed as

MicrowavesCarcinoma, Squamous CellClinical Laboratory TechniquesDNAGlyceraldehyde-3-Phosphate DehydrogenasesHumansLaboratoriesMouth NeoplasmsPolymerase Chain ReactionDNAGlyceraldehyde-3-Phosphate DehydrogenasesGAPDH geneMicrowave tissue processingmolecular pathologyoral squamous cell carcinomapolymerase chain reaction

Identifiers

PMID30607077
PMCPMC6308768
OpenAlexW2968686859

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.