ArticleThe Plant journal : for cell and molecular biology2019
High-throughput 3D modelling to dissect the genetic control of leaf elongation in barley (Hordeum vulgare).
Article in The Plant journal : for cell and molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Three-dimensional phenotyping: Technological advances and applications in genomics-assisted crop breeding.Plant communications · 2026Review
- Organ-level 3D phenotyping of saffron using a low-cost dual-camera workflow.Plant methods · 2026Article
- Mapping and quantifying unique branching structures in lentil (Lens culinaris Medik.).Plant methods · 2024Article
- Temporal phenomic predictions from unoccupied aerial systems can outperform genomic predictions.G3 (Bethesda, Md.) · 2023Article
- Identification of QTL underlying the main stem related traits in a doubled haploid barley population.Frontiers in plant science · 2022Article
- Large-scale field phenotyping using backpack LiDAR and CropQuant-3D to measure structural variation in wheat.Plant physiology · 2021Article
- Unoccupied aerial system enabled functional modeling of maize height reveals dynamic expression of loci.Plant direct · 2020Article
- Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform.Journal of experimental botany · 2020Article
- Dissecting new genetic components of salinity tolerance in two-row spring barley at the vegetative and reproductive stages.PloS one · 2020Article
- Smoothing and extraction of traits in the growth analysis of noninvasive phenotypic data.Plant methods · 2020Article
- Non-Invasive Phenotyping Reveals Genomic Regions Involved in Pre-Anthesis Drought Tolerance and Recovery in Spring Barley.Frontiers in plant science · 2019Article
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Authors and funding
13 authors.
Funding
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Abstract
To optimize shoot growth and structure of cereals, we need to understand the genetic components controlling initiation and elongation. While measuring total shoot growth at high throughput using 2D imaging has progressed, recovering the 3D shoot structure of small grain cereals at a large scale is still challenging. Here, we present a method for measuring defined individual leaves of cereals, such as wheat and barley, using few images. Plant shoot modelling over time was used to measure the initiation and elongation of leaves in a bi-parental barley mapping population under low and high soil salinity. We detected quantitative trait loci (QTL) related to shoot growth per se, using both simple 2D total shoot measurements and our approach of measuring individual leaves. In addition, we detected QTL specific to leaf elongation and not to total shoot size. Of particular importance was the detection of a QTL on chromosome 3H specific to the early responses of leaf elongation to salt stress, a locus that could not be detected without the computer vision tools developed in this study.
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