Evidence map›Paper›PMID 30604108›Full record

ArticleThe protein journal2019

Grafting, Stripping and Stapling of Helical Peptides from the Dimerization Interface of ONFH-Related Bone Morphogenetic Protein-2.

Wenqi Song, Kunzheng Wang, Wei Wang, Pei Yang, Xiaoqian Dang

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Article in The protein journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Wenqi SongDepartment of Orthopedics, The Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, 710004, China.
Kunzheng WangDepartment of Orthopedics, The Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, 710004, China. kunzhengwwang@sina.cn.
Wei WangDepartment of Orthopedics, The Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, 710004, China.
Pei YangDepartment of Orthopedics, The Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, 710004, China.
Xiaoqian DangDepartment of Orthopedics, The Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, 710004, China.
Second Affiliated Hospital of Xi'an Jiaotong University · CNXi'an Jiaotong University · CNShanghai Jiao Tong University · CN

Funding

National Natural Science Foundation of China 81371962
6 · The paper itself

Abstract

Transforming growth factor-β/bone morphogenetic protein (TGF-β/BMP) signaling plays a fundamental role in embryonic skeletal development and postnatal bone homeostasis. The signaling pivot protein BMP-2 belongs to the TGF-β superfamily and has been implicated in the pathogenesis of osteonecrosis of femoral head (ONFH). The biologically functional BMP-2 is a homodimer that has two tightly packed cores at its dimerization interface; each core is defined by the intermolecular interaction between a helical arm from one monomer and a hydrophobic pocket from another monomer. Inhibition and disruption of BMP-2 dimerization have been recognized as an attractive therapeutic strategy against ONFH. Here, we investigate the self-binding behavior of helical arm-derived peptides to the BMP-2 dimerization interface. The native BMP-2 helical arm and its several grafted versions from BMP-4, BMP-6 and BMP-7 are stripped from the intact dimerization interface to generate a number of isolated helical peptides. Computational simulations demonstrate that the stripping does not substantially influence the direct intermolecular interaction between BMP-2 monomer and these helical peptides or desolvation effect upon the interaction. However, the C-terminus of stripped peptides is found to have an intrinsic disorder and large flexibility in the isolated state, which would impair the rebinding of stripped peptides to BMP-2. Next, we rationally design a hydrocarbon bridge across the C-terminal residues 65 and 69 of helical peptides, which can effectively constrain peptide conformational flexibility in the isolated state, thus considerably promoting the binding potency of stripped helical peptides. Circular dichroism (CD) spectroscopy reveals that the peptide helicity increases from 51.8 to 67.9% upon hydrocarbon stapling. Fluorescence polarization assays substantiate that, as designed, the stapling can convert these helical peptides from weak binders to moderate or good binders of BMP-2 protein; their K

Indexed as

Femur Head NecrosisProtein MultimerizationBone Morphogenetic Protein 2HumansPeptidesProtein Structure, SecondaryBMP2 protein, humanBone Morphogenetic Protein 2PeptidesBone morphogenetic protein-2Helical peptideHydrocarbon staplingOsteonecrosis of femoral headPeptide-mediated protein–protein interaction

Identifiers

PMID30604108
OpenAlexW2907292941

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.