Evidence map›Paper›PMID 30603787›Full record

ArticlePlanta2019

Candidate genes and genome-wide association study of grain protein content and protein deviation in durum wheat.

D Nigro, A Gadaleta, G Mangini, P Colasuonno, I Marcotuli, A Giancaspro, S L Giove, R Simeone, A Blanco

Abstract read
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In one paragraph

Article in Planta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 88 citations in OpenAlex.

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  17. Development and marker-trait relationships of functional markers for glutamine synthetaseMolecular breeding : new strategies in plant improvement · 2023
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

D NigroDepartment of Soil, Plant and Food Sciences, Genetics and Plant Breeding Section, University of Bari, Bari, Italy.
A GadaletaDepartment of Agricultural and Environmental Science, Research Unit of "Genetics and Plant Biotechnology", University of Bari, Bari, Italy. agata.gadaleta@uniba.it.
G ManginiDepartment of Soil, Plant and Food Sciences, Genetics and Plant Breeding Section, University of Bari, Bari, Italy.
P ColasuonnoDepartment of Agricultural and Environmental Science, Research Unit of "Genetics and Plant Biotechnology", University of Bari, Bari, Italy.
I MarcotuliDepartment of Agricultural and Environmental Science, Research Unit of "Genetics and Plant Biotechnology", University of Bari, Bari, Italy.
A GiancasproDepartment of Agricultural and Environmental Science, Research Unit of "Genetics and Plant Biotechnology", University of Bari, Bari, Italy.
S L GioveDepartment of Agricultural and Environmental Science, Research Unit of "Genetics and Plant Biotechnology", University of Bari, Bari, Italy.
R SimeoneDepartment of Soil, Plant and Food Sciences, Genetics and Plant Breeding Section, University of Bari, Bari, Italy.
A BlancoDepartment of Soil, Plant and Food Sciences, Genetics and Plant Breeding Section, University of Bari, Bari, Italy.
University of Bari Aldo Moro · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionStable QTL for grain protein content co-migrating with nitrogen-related genes have been identified by the candidate genes and genome-wide association mapping approaches useful for marker-assisted selection. Grain protein content (GPC) is one of the most important quality traits in wheat, defining the nutritional and end-use properties and rheological characteristics. Over the years, a number of breeding programs have been developed aimed to improving GPC, most of them having been prevented by the negative correlation with grain yield. To overcome this issue, a collection of durum wheat germplasm was evaluated for both GPC and grain protein deviation (GPD) in seven field trials. Fourteen candidate genes involved in several processes related to nitrogen metabolism were precisely located on two high-density consensus maps of common and durum wheat, and six of them were found to be highly associated with both traits. The wheat collection was genotyped using the 90 K iSelect array, and 11 stable quantitative trait loci (QTL) for GPC were detected in at least three environments and the mean across environments by the genome-wide association mapping. Interestingly, seven QTL were co-migrating with N-related candidate genes. Four QTL were found to be significantly associated to increases of GPD, indicating that selecting for GPC could not affect final grain yield per spike. The combined approaches of candidate genes and genome-wide association mapping led to a better understanding of the genetic relationships between grain storage proteins and grain yield per spike, and provided useful information for marker-assisted selection programs.

Indexed as

DNA, PlantEdible GrainGenes, PlantGenome-Wide Association StudyGenotyping TechniquesPlant ProteinsPolymorphism, Single NucleotideQuantitative Trait LociTriticumDNA, PlantPlant ProteinsGenome-wide association mappingGPC and grain yield relationshipsGrain protein contentGrain protein deviationGrain yieldNitrogen-related genesQTL mappingSNP markers

Identifiers

PMID30603787
OpenAlexW2906992426

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.