Evidence map›Paper›PMID 30601841›Full record

ArticlePloS one2019

Genetic variants in genes related to inflammation, apoptosis and autophagy in breast cancer risk.

Johanna M Schuetz, Anne Grundy, Derrick G Lee, Agnes S Lai, Lindsay C Kobayashi, Harriet Richardson, Jirong Long, Wei Zheng, Kristan J Aronson, John J Spinelli and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. The Investigation of Associations betweenDiagnostics (Basel, Switzerland) · 2021
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Johanna M SchuetzCanada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, British Columbia, Canada.
Anne GrundyCRCHUM (Centre de recherche du Centre hospitalier de l'Université de Montréal), Montreal, QC, Canada.
Derrick G LeeDepartment of Cancer Control Research, British Columbia Cancer Agency, Vancouver, BC, Canada.ORCID 0000-0003-0079-8385
Agnes S LaiDepartment of Cancer Control Research, British Columbia Cancer Agency, Vancouver, BC, Canada.
Lindsay C KobayashiHarvard Center for Population and Development Studies, Harvard T. H. Chan School of Public Health, Cambridge, MA, United States of America.ORCID 0000-0003-2725-3107
Harriet RichardsonDepartment of Public Health Sciences, Queen's University, Kingston, ON, Canada.
Jirong LongVanderbilt Epidemiology Centre, Vanderbilt University Medical Center, Nashville, TN, United States of America.
Wei ZhengVanderbilt Epidemiology Centre, Vanderbilt University Medical Center, Nashville, TN, United States of America.
Kristan J AronsonDepartment of Public Health Sciences, Queen's University, Kingston, ON, Canada.
John J SpinelliDepartment of Cancer Control Research, British Columbia Cancer Agency, Vancouver, BC, Canada.
Angela R Brooks-WilsonCanada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, British Columbia, Canada.ORCID 0000-0003-1009-6408
BC Cancer Agency · CAQueen's University · CAVanderbilt University Medical Center · USCentre Hospitalier de l’Université de Montréal · CAGeorgetown University · US

Funding

CIHR FRN#69036
6 · The paper itself

Abstract

backgroundInflammation contributes to breast cancer development through its effects on cell damage. This damage is usually dealt with by key genes involved in apoptosis and autophagy pathways.

methodsWe tested 206 single nucleotide polymorphisms (SNPs) in 54 genes related to inflammation, apoptosis and autophagy in a population-based breast cancer study of women of European (658 cases and 795 controls) and East Asian (262 cases and 127 controls) descent. Logistic regression was used to estimate odds ratios for breast cancer risk, and case-only analysis to compare breast cancer subtypes (defined by ER/PR/HER2 status), with adjustment for confounders. We assessed statistical interactions between the SNPs and lifestyle factors (smoking status, physical activity and body mass index). RESULTS AND

conclusionAlthough no SNP was associated with breast cancer risk among women of European descent, we found evidence for an association among East Asians for rs1800925 (IL-13) and breast cancer risk (OR = 2.08; 95% CI: 1.32-3.28; p = 0.000779), which remained statistically significant after multiple testing correction (padj = 0.0350). This association was replicated in a meta-analysis of 4305 cases and 4194 controls in the Shanghai Breast Cancer Genetics Study (OR 1.12, 95% CI: 1.03-1.21, p = 0.011). Further, we found evidence of an interaction between rs7874234 (TSC1) and physical activity among women of East Asian descent.

Indexed as

AdultApoptosisAutophagyBreast NeoplasmsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansInflammationLogistic ModelsMiddle AgedOdds RatioPolymorphism, Single NucleotideReceptors, EstrogenReceptors, ProgesteroneYoung AdultReceptors, EstrogenReceptors, Progesterone

Identifiers

PMID30601841
PMCPMC6314637
OpenAlexW2907312381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.