Evidence map›Paper›PMID 30598078›Full record

ArticleBMC medical genetics2018

Integrated molecular characterization of adult soft tissue sarcoma for therapeutic targets.

Jihyun Kim, June Hyuk Kim, Hyun Guy Kang, Seog Yun Park, Jung Yeon Yu, Eun Young Lee, Sung Eun Oh, Young Ho Kim, Tak Yun, Charny Park and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Repurposing public sarcoma multi-omics for neoantigen discovery.Cancer immunology, immunotherapy : CII · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Targeted Treatment of Soft-Tissue Sarcoma.Journal of personalized medicine · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Jihyun KimClinical Genomic Analysis Branch, Research Institute, National Cancer Center, 323 Ilsan-ro, Ilsandong-gu, Goyang, Gyeonggi, 10408, South Korea.
June Hyuk KimOrthopaedic Oncology Clinic, Hospital, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Hyun Guy KangOrthopaedic Oncology Clinic, Hospital, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Seog Yun ParkDivision of Pathology, Hospital, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Jung Yeon YuTranslational Research Branch, Research Institute, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Eun Young LeeTranslational Research Branch, Research Institute, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Sung Eun OhOrthopaedic Oncology Clinic, Hospital, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Young Ho KimRare Cancer Branch, Research Institute, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Tak YunRare Cancer Branch, Research Institute, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea.
Charny ParkClinical Genomic Analysis Branch, Research Institute, National Cancer Center, 323 Ilsan-ro, Ilsandong-gu, Goyang, Gyeonggi, 10408, South Korea.
Soo Young ChoClinical Genomic Analysis Branch, Research Institute, National Cancer Center, 323 Ilsan-ro, Ilsandong-gu, Goyang, Gyeonggi, 10408, South Korea. sooycho@ncc.re.kr.
Hye Jin YouDepartment of Cancer Biomedical Science, NCC-GCSP, National Cancer Center, Goyang, Gyeonggi, 10408, South Korea. hjyou@ncc.re.kr.
National Cancer Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSeveral studies have investigated the molecular drivers and therapeutic targets in adult soft tissue sarcomas. However, such studies are limited by the genomic heterogeneity and rarity of sarcomas, particularly in those with complex and unbalanced karyotypes. Additional biomarkers are needed across sarcoma types to improve therapeutic strategies. To investigate the molecular characteristics of complex karyotype sarcomas (CKSs) for therapeutic targets, we performed genomic profiling.

resultsThe mutational landscape showed that TP53, ATRX, and PTEN genes were highly mutated. CKS samples were categorized into three groups based on copy number variations that were associated with CDK4 and RB1 signatures. Integrated analysis of genomic and transcriptomic data revealed several pathways related to PDGFR, which could be a strategic target for anti-sarcoma therapy.

conclusionsThis study provides a detailed molecular classification of CKSs and proposes several therapeutic targets. Targeted or combinational therapies for treating CKS should be considered before chemotherapy.

Indexed as

Gene Expression Regulation, NeoplasticAdultAgedAntineoplastic AgentsCell Line, TumorCyclin-Dependent Kinase 4DNA Copy Number VariationsExome SequencingFemaleGene Expression ProfilingHumansKaryotypingMaleMicrosatellite InstabilityMiddle AgedMolecular Targeted TherapyAntineoplastic AgentsATRX protein, humanCDK4 protein, humanCyclin-Dependent Kinase 4Neoplasm ProteinsPTEN PhosphohydrolasePTEN protein, humanRB1 protein, humanReceptor, Platelet-Derived Growth Factor alphaRetinoblastoma Binding ProteinsTP53 protein, humanTumor Suppressor Protein p53Ubiquitin-Protein LigasesX-linked Nuclear ProteinCDK4 and RB1Complex karyotype sarcomaMolecular characterizationPDGFRA

Identifiers

PMID30598078
PMCPMC6311917
OpenAlexW2907061478

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.