Evidence map›Paper›PMID 30596881›Full record

ArticleAnnals of botany2019

Root and shoot variation in relation to potential intermittent drought adaptation of Mesoamerican wild common bean (Phaseolus vulgaris L.).

Jorge C Berny Mier Y Teran, Enéas R Konzen, Viviana Medina, Antonia Palkovic, Andrea Ariani, Siu M Tsai, Matthew E Gilbert, P Gepts

Abstract read
In one paragraph

Article in Annals of botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Biocultural diversity and crop improvement.Emerging topics in life sciences · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. The aquaporin gene PvXIP1;2 conferring drought resistance identified by GWAS at seedling stage in common bean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  11. ContrastingFrontiers in plant science · 2022
    Article
  12. Article
  13. Genetic dissection of drought resistance based on root traits at the bud stage in common bean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  14. Overexpression of A Biotic Stress-InducibleInternational journal of molecular sciences · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jorge C Berny Mier Y TeranUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.
Enéas R KonzenUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.
Viviana MedinaUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.
Antonia PalkovicUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.
Andrea ArianiUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.
Siu M TsaiCentro de Energia Nuclear na Agricultura (CENA), Universidade de São Paulo, Piracicaba, SP, Brasil.
Matthew E GilbertUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.
P GeptsUniversity of California, Department of Plant Sciences/Mail Stop 1, Section of Crop & Ecosystem Sciences, Davis, CA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWild crop relatives have been potentially subjected to stresses on an evolutionary time scale prior to domestication. Among these stresses, drought is one of the main factors limiting crop productivity and its impact is likely to increase under current scenarios of global climate change. We sought to determine to what extent wild common bean (Phaseolus vulgaris) exhibited adaptation to drought stress, whether this potential adaptation is dependent on the climatic conditions of the location of origin of individual populations, and to what extent domesticated common bean reflects potential drought adaptation.

methodsAn extensive and diverse set of wild beans from across Mesoamerica, along with a set of reference Mesoamerican domesticated cultivars, were evaluated for root and shoot traits related to drought adaptation. A water deficit experiment was conducted by growing each genotype in a long transparent tube in greenhouse conditions so that root growth, in addition to shoot growth, could be monitored.

resultsPhenotypic and landscape genomic analyses, based on single-nucleotide polymorphisms, suggested that beans originating from central and north-west Mexico and Oaxaca, in the driest parts of their distribution, produced more biomass and were deeper-rooted. Nevertheless, deeper rooting was correlated with less root biomass production relative to total biomass. Compared with wild types, domesticated types showed a stronger reduction and delay in growth and development in response to drought stress. Specific genomic regions were associated with root depth, biomass productivity and drought response, some of which showed signals of selection and were previously related to productivity and drought tolerance.

conclusionsThe drought tolerance of wild beans consists in its stronger ability, compared with domesticated types, to continue growth in spite of water-limited conditions. This study is the first to relate bean response to drought to environment of origin for a diverse selection of wild beans. It provides information that needs to be corroborated in crosses between wild and domesticated beans to make it applicable to breeding programmes.

Indexed as

PhaseolusAcclimatizationAdaptation, PhysiologicalDroughtsMexicoCrop wild relativedomesticationecological genomicsgenome-wide associationgenotyping by sequencinggeoreferencinlocal climate adaptationplant growthsingle-nucleotide polymorphism

Identifiers

PMID30596881
PMCPMC6881220

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.