Evidence map›Paper›PMID 30595505›Full record

ArticleCancer cell2019

Histone H3.3 K27M Accelerates Spontaneous Brainstem Glioma and Drives Restricted Changes in Bivalent Gene Expression.

Jon D Larson, Lawryn H Kasper, Barbara S Paugh, Hongjian Jin, Gang Wu, Chang-Hyuk Kwon, Yiping Fan, Timothy I Shaw, André B Silveira, Chunxu Qu and 16 more

Abstract read
In one paragraph

Article in Cancer cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 185 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
185citing papers in PubMed, 2 pooled it
16.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

185 citing papers in PubMed, 2 syntheses or guidelines pooled it, 313 citations in OpenAlex.

  1. Pooled it
  2. Association BetweenCancer control : journal of the Moffitt Cancer Center
    Pooled it
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  18. Modeling pediatric brain tumors with human stem cells.Frontiers in cellular neuroscience · 2026
    Review
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  20. Article

125 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 1 institution in 1 country.

Jon D LarsonDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Lawryn H KasperDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Barbara S PaughDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Hongjian JinDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Gang WuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Chang-Hyuk KwonDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Yiping FanDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Timothy I ShawDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
André B SilveiraDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Chunxu QuDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Raymond XuDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Xiaoyan ZhuDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Junyuan ZhangDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Helen R RussellDepartment of Genetics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Jennifer L PetersCellular Imaging Shared Resource, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
David FinkelsteinDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Beisi XuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Tong LinDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Christopher L TinkleDepartment of Radiation Oncology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Zoltan PatayDepartment of Diagnostic Imaging, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Arzu Onar-ThomasDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Stanley B PoundsDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Peter J McKinnonDepartment of Genetics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
David W EllisonDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Jinghui ZhangDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Suzanne J BakerDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA. Electronic address: suzanne.baker@stjude.org.
St. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
The DNA Damage Response and Tumorigenesis in the BrainP01CA096832 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BAKER, SUZANNE J. · 2003 to 2025
$38.0M
ATM and DNA Damage in the Nervous SystemR01NS037956 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MCKINNON, PETER J · 1998 to 2022
$7.6M
Cooperating Pathways in GliomagenesisR01CA188516 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BAKER, SUZANNE J. · 2014 to 2018
$1.9M
MULTIMODAL PRECLINICAL CANCER IMAGING AND THERAPY RESEARCH SPECIALISTR50CA211481 · NCI · WASHINGTON UNIVERSITY · PI AKERS, WALTER JOHN · 2016 to 2020
$841k
NCI NIH HHS P01 CA096832NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA188516NCI NIH HHS R50 CA211481NINDS NIH HHS R01 NS037956
6 · The paper itself

Abstract

Diffuse intrinsic pontine gliomas (DIPGs) are incurable childhood brainstem tumors with frequent histone H3 K27M mutations and recurrent alterations in PDGFRA and TP53. We generated genetically engineered inducible mice and showed that H3.3 K27M enhanced neural stem cell self-renewal while preserving regional identity. Neonatal induction of H3.3 K27M cooperated with activating platelet-derived growth factor receptor α (PDGFRα) mutant and Trp53 loss to accelerate development of diffuse brainstem gliomas that recapitulated human DIPG gene expression signatures and showed global changes in H3K27 posttranslational modifications, but relatively restricted gene expression changes. Genes upregulated in H3.3 K27M tumors were enriched for those associated with neural development where H3K27me3 loss released the poised state of apparently bivalent promoters, whereas downregulated genes were enriched for those encoding homeodomain transcription factors.

Indexed as

AnimalsBrain Stem NeoplasmsCells, CulturedCell Self RenewalEpigenesis, GeneticGene Expression ProfilingGene Expression Regulation, NeoplasticGliomaHistonesHumansMiceMutationNeural Stem CellsReceptor, Platelet-Derived Growth Factor alphaRhombencephalonSequence Analysis, RNAHistonesReceptor, Platelet-Derived Growth Factor alphaTP53 protein, humanTumor Suppressor Protein p53bivalentDIPGepigeneticgliomaH3K27me3histone H3 K27MknockinmouseoncohistonePDGFRA

Identifiers

PMID30595505
PMCPMC6570409
OpenAlexW2906879840

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.