Evidence map›Paper›PMID 30594179›Full record

ArticleBMC biotechnology2018

Alterations in the proteomic composition of Serratia marcescens in response to manganese (II).

Pollyana Santos Queiroz, France Anne Dias Ruas, Natália Rocha Barboza, William de Castro Borges, Renata Guerra-Sá

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Antioxidants (Basel, Switzerland) · 2020
    Article
  2. Proteomic profiling ofBioImpacts : BI · 2020
    Article
  3. Article
  4. Shotgun proteomic analysis of nanoparticle-synthesizingMicrobiology (Reading, England) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Pollyana Santos QueirozLaboratório de Bioquímica e Biologia Molecular, Departamento de Ciências Biológicas (DECBI) & Instituto de Ciências Exatas e Biológica (NUPEB), Campus Morro do Cruzeiro, Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
France Anne Dias RuasLaboratório de Bioquímica e Biologia Molecular, Departamento de Ciências Biológicas (DECBI) & Instituto de Ciências Exatas e Biológica (NUPEB), Campus Morro do Cruzeiro, Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Natália Rocha BarbozaLaboratório de Bioquímica e Biologia Molecular, Departamento de Ciências Biológicas (DECBI) & Instituto de Ciências Exatas e Biológica (NUPEB), Campus Morro do Cruzeiro, Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
William de Castro BorgesLaboratório de Enzimologia e Proteômica, Departamento de Ciências Biológicas (DECBI), Núcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Ouro Preto, Minas Gerais, Brazil.
Renata Guerra-SáLaboratório de Bioquímica e Biologia Molecular, Departamento de Ciências Biológicas (DECBI) & Instituto de Ciências Exatas e Biológica (NUPEB), Campus Morro do Cruzeiro, Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil. rguerrasa@gmail.com.
Universidade Federal de Ouro Preto · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProteomics is an important tool for the investigation of dynamic physiological responses of microbes under heavy metal stress. To gain insight into how bacteria respond to manganese (II) and identify the proteins involved in Mn (II) oxidation, the shotgun proteomics approach was applied to a potential Mn (II)-oxidizing Serratia marcescens strain cultivated in the absence and presence of Mn (II).

resultsThe LG1 strain, which grew equally well in the two conditions, was found to express a set of proteins related to cellular processes vital for survival, as well as proteins involved in adaptation and tolerance to Mn (II). The multicopper oxidase CueO was identified, indicating its probable participation in the Mn (II) bio-oxidation; however, its expression was not modulated by the presence of Mn (II). A set of proteins related to cell and metabolic processes vital to the cells were downregulated in the presence of Mn (II), while cell membrane-related proteins involved in the maintenance of cell integrity and survival under stress were upregulated under this condition.

conclusionsThese findings indicate that the LG1 strain may be applied successfully in the bioremediation of Mn (II), and the shotgun approach provides an efficient means for obtaining the total proteome of this species.

Indexed as

Bacterial ProteinsManganeseProteomeProteomicsSerratia marcescensBacterial ProteinsManganeseProteomeMn (II)-modulated protein expressionMn (II) oxidationMulticopper oxidaseSerratia marcescens proteome

Identifiers

PMID30594179
PMCPMC6311052
OpenAlexW2906863982

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.