Evidence map›Paper›PMID 30591068›Full record

ArticleBMC veterinary research2018

Inherited selective cobalamin malabsorption in Komondor dogs associated with a CUBN splice site variant.

John C Fyfe, Shelby L Hemker, Alycia Frampton, Karthik Raj, Peter L Nagy, Kristi J Gibbon, Urs Giger

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Frontiers in genetics · 2021
    Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

John C FyfeLaboratory of Comparative Medical Genetics, Michigan State University, 567 Wilson Road, East Lansing, MI, 48824, USA.
Shelby L HemkerLaboratory of Comparative Medical Genetics, Michigan State University, 567 Wilson Road, East Lansing, MI, 48824, USA.
Alycia FramptonSection of Medical Genetics, University of Pennsylvania, 3900 Delancey Street, Philadelphia, PA, 19104-6010, USA.
Karthik RajSection of Medical Genetics, University of Pennsylvania, 3900 Delancey Street, Philadelphia, PA, 19104-6010, USA.
Peter L NagyLaboratory of Personalized Genomic Medicine, Department of Pathology & Cell Biology, Columbia University - College of Physicians & Surgeons, 630 West 168th Street, New York, NY, 10032, USA.
Kristi J GibbonOregon Veterinary Referral Associates, 444 B Street, Springfield, OR, 97477, USA.
Urs GigerSection of Medical Genetics, University of Pennsylvania, 3900 Delancey Street, Philadelphia, PA, 19104-6010, USA. giger@upenn.edu.ORCID http://orcid.org/0000-0002-4770-4107
University of Pennsylvania · USChildren's Hospital of Pittsburgh · USColorado Heights University · USMichigan State University · USNEC (Japan) · JP

Funding

Referral Ctr-Animal models of human genetic diseaseP40OD010939 · OD · UNIVERSITY OF PENNSYLVANIA · PI CASAL, MARGRET L · 2012 to 2023
$7.9M
Short-term Training: students in health professional schoolsT35OD010919 · OD · UNIVERSITY OF PENNSYLVANIA · PI Michael Lee Atchison · 2012 to 2026
$1.8M
Project SEARCH (Scanning EARs for Child Health)R21TW010939 · FIC · BOSTON UNIVERSITY MEDICAL CAMPUS · PI GILL, CHRISTOPHER J, MWANANYANDA, LAWRENCE · 2018 to 2019
$407k
Molecular Mechanism of Polarized Cubilin ExpressionR21DK064161 · NIDDK · MICHIGAN STATE UNIVERSITY · PI FYFE, JOHN C · 2003 to 2004
$295k
NIDDK NIH HHS R21 DK064161NIH HHS P40 OD010939NIH HHS T35 OD010919NIH Office of the Director OD 010939
6 · The paper itself

Abstract

backgroundThree Komondor dogs in a small family and 3 sporadic cases exhibited a constellation of signs that included juvenile-onset of failure-to-thrive, inappetence, vomiting and/or diarrhea, and weakness. In each we documented dyshematopoiesis, increased anion gap, methylmalonic acidemia/-uria, and serum cobalamin deficiency. Urine protein electrophoresis demonstrated excretion of cubam ligands. All clinical signs and metabolic abnormalities, except proteinuria, were reversed by regular parenteral cobalamin administration. The pattern of occurrence and findings in the disorder suggested an autosomal recessive inheritance of cobalamin malabsorption with proteinuria, a condition in humans called Imerslund-Gräsbeck syndrome. The purpose of this study was to determine the molecular cause of this disorder in Komondors.

resultsWhole genome sequencing of two affected Komondor dogs of unknown relatedness and one parent and a clinically-normal littermate of an affected dog revealed a pathogenic single-base change in the CUBN intron 55 splice donor consensus sequence (NM_001003148.1: c.8746 + 1G > A) that was homozygous in affected dogs and heterozygous in the unaffected parents. Alleles of the variant co-segregated with alleles of the disease locus in the entire family and all more distantly-related sporadic cases. A population study using a simple allele-specific DNA test indicated mutant allele frequencies of 8.3 and 4.5% among North American and Hungarian Komondors, respectively.

conclusionsDNA testing can be used diagnostically in Komondors when clinical signs are suggestive of cobalamin deficiency or to inform Komondor breeders prospectively and prevent occurrence of future affected dogs. This represents the third cubilin variant causing inherited selective cobalamin malabsorption in a large animal ortholog of human Imerslund-Gräsbeck syndrome.

Indexed as

Anemia, MegaloblasticAnimalsBreedingDog DiseasesDogsFemaleGenotypeMalabsorption SyndromesMaleProtein IsoformsProteinuriaReceptors, Cell SurfaceUnited StatesVitamin B 12Vitamin B 12 DeficiencyWhole Genome Sequencingintrinsic factor-cobalamin receptorProtein IsoformsReceptors, Cell SurfaceVitamin B 12AmnionlessAnimal modelCubilinFailure to thriveInborn error of metabolismMethylmalonic aciduriaVitamin B12

Identifiers

PMID30591068
PMCPMC6309081
OpenAlexW2907200501

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.