Evidence map›Paper›PMID 30590036›Full record

ArticleCell reports2018

Precise Post-translational Tuning Occurs for Most Protein Complex Components during Meiosis.

Amy Rose Eisenberg, Andrea Higdon, Abdurrahman Keskin, Stefanie Hodapp, Marko Jovanovic, Gloria Ann Brar

Abstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Membrane and organelle rearrangement during ascospore formation in budding yeast.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Cotranslational interaction of human EBP50 and ezrin overcomes masked binding site during complex assembly.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Amy Rose EisenbergDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Andrea HigdonDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Abdurrahman KeskinDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Stefanie HodappDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Marko JovanovicDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Gloria Ann BrarDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address: gabrar@berkeley.edu.

Funding

THE MOLECULAR BASIS OF CELL FUNCTIONT32GM007232 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BILDER, DAVID, UNAL, ELCIN · 1985 to 2022
$36.4M
GENOMICST32HG000047 · NHGRI · UNIVERSITY OF CALIFORNIA BERKELEY · PI RASMUS NIELSEN, Daniel Soleyman Rokhsar · 2000 to 2026
$13.5M
Dissecting the roles of pervasive short ORFs in meiosisDP2GM119138 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BRAR, GLORIA ANN · 2015 to 2015
$2.4M
Regulation of Protein Production Dynamics:RNA Binding Proteins and the Ribosome CodeR35GM128802 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JOVANOVIC, MARKO · 2018 to 2022
$2.3M
DEVELOPMENT OF GENOMIC INSTRUMENTATIONK22HG000047 · NHGRI · UNIVERSITY OF CALIFORNIA IRVINE · PI BRODY, JAMES P · 2000 to 2004
$964k
NHGRI NIH HHS K22 HG000047NIGMS NIH HHS DP2 GM119138NIGMS NIH HHS R35 GM128802NIGMS NIH HHS T32 GM007232
6 · The paper itself

Abstract

Protein degradation is known to be a key component of expression regulation for individual genes, but its global impact on gene expression has been difficult to determine. We analyzed a parallel gene expression dataset of yeast meiotic differentiation, identifying instances of coordinated protein-level decreases to identify new cases of regulated meiotic protein degradation, including of ribosomes and targets of the meiosis-specific anaphase-promoting complex adaptor Ama1. Comparison of protein and translation measurements over time also revealed that, although meiotic cells are capable of synthesizing protein complex members at precisely matched levels, they typically do not. Instead, the members of most protein complexes are synthesized imprecisely, but their protein levels are matched, indicating that wild-type eukaryotic cells routinely use post-translational adjustment of protein complex partner levels to achieve proper stoichiometry. Outlier cases, in which specific complex components show divergent protein-level trends, suggest timed regulation of these complexes.

Indexed as

MeiosisProtein Processing, Post-TranslationalGene Expression Regulation, FungalMultiprotein ComplexesProtein BindingProtein BiosynthesisProtein MultimerizationProteolysisRibosomal ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsMultiprotein ComplexesRibosomal ProteinsSaccharomyces cerevisiae ProteinsAma1gene expressionmass spectrometrymeiosisprotein complexesprotein degradationribosomeribosome profilingstoichiometrytranslation

Identifiers

PMID30590036
PMCPMC6328264

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.