Evidence map›Paper›PMID 30589433›Full record

ArticleAlcoholism, clinical and experimental research2019

Genetic Influences on the Amount of Cell Death in the Neural Tube of BXD Mice Exposed to Acute Ethanol at Midgestation.

Emilie T Théberge, Jessica A Baker, Candis Dubose, Julia K Boyle, Kristina Balce, Dan Goldowitz, Kristin M Hamre

Abstract read
In one paragraph

Article in Alcoholism, clinical and experimental research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Binge-Like Ethanol Drinking IncreasesNeuroscience insights · 2021
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Emilie T ThébergeCentre for Molecular Medicine and Therapeutics , British Columbia Children's Research Institution, University of British Columbia, Vancouver, British Columbia, Canada.
Jessica A BakerDepartment of Anatomy and Neurobiology , University of Tennessee Health Science Center, Memphis, Tennessee.ORCID 0000-0002-4527-0640
Candis DuboseDepartment of Anatomy and Neurobiology , University of Tennessee Health Science Center, Memphis, Tennessee.
Julia K BoyleCentre for Molecular Medicine and Therapeutics , British Columbia Children's Research Institution, University of British Columbia, Vancouver, British Columbia, Canada.
Kristina BalceCentre for Molecular Medicine and Therapeutics , British Columbia Children's Research Institution, University of British Columbia, Vancouver, British Columbia, Canada.
Dan GoldowitzCentre for Molecular Medicine and Therapeutics , British Columbia Children's Research Institution, University of British Columbia, Vancouver, British Columbia, Canada.
Kristin M HamreDepartment of Anatomy and Neurobiology , University of Tennessee Health Science Center, Memphis, Tennessee.
University of British Columbia · CAUniversity of Tennessee Health Science Center · US

Funding

Maternal genotype, choline intervention,& epigenetics in Fetal Alcohol SyndromeR01AA023508 · NIAAA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI GOLDOWITZ, DANIEL, HAMRE, KRISTIN M · 2016 to 2020
$1.6M
Evaluation of the Genetic Contribution of the Neuroinflammatory Response Following Neonatal Alcohol ExposureF31AA026498 · NIAAA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI BAKER, JESSICA A · 2017 to 2020
$108k
Canadian Network of Centres of ExcellenceNeuroDevNetNIAAA NIH HHS F31 AA026498NIAAA NIH HHS R01 AA023508
6 · The paper itself

Abstract

backgroundFetal alcohol spectrum disorders (FASD) have a strong genetic component although the genes that underlie this are only beginning to be elucidated. In the present study, one of the most common phenotypes of FASD, cell death within the early developing neural tube, was examined across a genetic reference population in a reverse genetics paradigm with the goal of identifying genetic loci that could influence ethanol (EtOH)-induced apoptosis in the early developing neural tube.

methodsBXD recombinant inbred mice as well as the parental strains were used to evaluate genetic differences in EtOH-induced cell death after exposure on embryonic day 9.5. Dams were given either 5.8 g/kg EtOH or isocaloric maltose-dextrin in 2 doses via intragastric gavage. Embryos were collected 7 hours after the initial exposure and cell death evaluated via TUNEL staining in the brainstem and forebrain. Genetic loci were evaluated using quantitative trait locus (QTL) analysis at GeneNetwork.org.

resultsSignificant strain differences were observed in the levels of EtOH-induced cell death that were due to genetic effects and not confounding variables such as differences in developmental maturity or cell death kinetics. Comparisons between the 2 regions of the developing neural tube showed little genetic correlation with the QTL maps exhibiting no overlap. Significant QTLs were found on murine mid-chromosome 4 and mid-chromosome 14 only in the brainstem. Within these chromosomal loci, a number of interesting candidate genes were identified that could mediate this differential sensitivity including Nfia (nuclear factor I/A) and Otx2 (orthodenticle homeobox 2).

conclusionsThese studies demonstrate that the levels of EtOH-induced cell death occur in strain- and region-dependent manners. Novel QTLs on mouse Chr4 and Chr14 were identified that modulate the differential sensitivity to EtOH-induced apoptosis in the embryonic brainstem. The genes underlying these QTLs could identify novel molecular pathways that are critical in this phenotype.

Indexed as

AnimalsApoptosisBrain StemEthanolFemaleMiceMice, Inbred StrainsNeural TubePregnancyProsencephalonQuantitative Trait LociSpecies SpecificityEthanolAlcohol Exposure at Embryonic Day 9.5ApoptosisBXD StrainsFASDGenetics

Identifiers

PMID30589433
PMCPMC6410727
OpenAlexW2906683036

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.