ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019
Genetic diversity patterns and domestication origin of soybean.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
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Who cites it
41 citing papers in PubMed.
- Selection of four mutant alleles of fatty acid desaturase genes for a stable high oleic and low linolenic acid soybean seed oil trait.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Korean Soybean Nested Association Mapping (K-SoyNAM) population: genetic linkage map, genetic mapping, and genotype imputation.BMC genomics · 2026Article
- Identification of genetic loci and domestication gene GmZFP1 associated with soybean hypocotyl elongation in seedling stage by genome-wide association study.BMC plant biology · 2026Article
- Identification of Novel Genetic Loci Related to 100-Seed Weight in the Korean Soybean Core Collection Using a Genome-Wide Association Study.International journal of molecular sciences · 2025Article
- Integrative genome-wide association and haplotype-based analyses reveal genetic structure and local adaptation in Korean landrace soybeans.BMC plant biology · 2025Article
- Uncovering the genetic landscape of soybean accessions from Kazakhstan in comparison with global germplasm using whole genome resequencing.BMC genomics · 2025Article
- Towards Stewardship of Wild Species and Their Domesticated Counterparts: A Case Study in Northern Wild Rice (Ecology and evolution · 2025Article
- Exploring the Complex Mechanisms of Isoflavones: From Cell Bioavailability, to Cell Dynamics and Breast Cancer.Phytotherapy research : PTR · 2025Review
- Genetic diversity and population structure of soybean (Glycine max (L.) Merril) germplasm.PloS one · 2025Article
- Genetic diversity, population structure in a historical panel of Brazilian soybean cultivars.PloS one · 2025Article
- Phenotypic characterization of soybean genetic resources at multiple locations: breeding implications for enhancing environmental resilience, yield and protein content.Frontiers in plant science · 2025Article
- Genetic dissection of resistance to Phytophthora sojae using genome-wide association and linkage analysis in soybean [Glycine max (L.) Merr.].TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Genetic Control of Tolerance to Drought Stress in Wild Soybean (Plants (Basel, Switzerland) · 2024Article
- Identification of Quantitative Trait Loci Controlling Root Morphological Traits in an Interspecific Soybean Population Using 2D Imagery Data.International journal of molecular sciences · 2024Article
- Assessing genetic diversity and geographical differentiation in a global collection of wild soybean (Glycine soja Sieb. et Zucc.) and assigning a mini-core collection.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024Article
- Common signatures of selection reveal target loci for breeding across soybean populations.The plant genome · 2024Article
- Population Structure and Genetic Diversity of the 175 Soybean Breeding Lines and Varieties Cultivated in West Siberia and Other Regions of Russia.Plants (Basel, Switzerland) · 2023Article
- Multi-omics assisted breeding for biotic stress resistance in soybean.Molecular biology reports · 2023Review
- Domestication of azuki bean and soybean in Japan: From the insight of archeological and molecular evidence.Breeding science · 2023Article
- Genetic Diversity of Korean Wild Soybean Core Collections and Genome-Wide Association Study for Days to Flowering.Plants (Basel, Switzerland) · 2023Article
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11 authors.
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Abstract
key messageGenotyping data of a comprehensive Korean soybean collection obtained using a large SNP array were used to clarify global distribution patterns of soybean and address the evolutionary history of soybean. Understanding diversity and evolution of a crop is an essential step to implement a strategy to expand its germplasm base for crop improvement research. Accessions intensively collected from Korea, which is a small but central region in the distribution geography of soybean, were genotyped to provide sufficient data to underpin population genetic questions. After removing natural hybrids and duplicated or redundant accessions, we obtained a non-redundant set comprising 1957 domesticated and 1079 wild accessions to perform population structure analyses. Our analysis demonstrates that while wild soybean germplasm will require additional sampling from diverse indigenous areas to expand the germplasm base, the current domesticated soybean germplasm is saturated in terms of genetic diversity. We then showed that our genome-wide polymorphism map enabled us to detect genetic loci underlying flower color, seed-coat color, and domestication syndrome. A representative soybean set consisting of 194 accessions was divided into one domesticated subpopulation and four wild subpopulations that could be traced back to their geographic collection areas. Population genomics analyses suggested that the monophyletic group of domesticated soybeans was likely originated at a Japanese region. The results were further substantiated by a phylogenetic tree constructed from domestication-associated single nucleotide polymorphisms identified in this study.
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