Evidence map›Paper›PMID 30587782›Full record

ArticleInternational journal of molecular sciences2018

Shot-Gun Proteomic Analysis on Roots of Arabidopsis

Tomáš Takáč, Olga Šamajová, Pavol Vadovič, Tibor Pechan, Jozef Šamaj

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Tomáš TakáčCentre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů, 2778371 Olomouc, Czech Republic. tomas.takac@upol.cz.ORCID 0000-0002-1569-1305
Olga ŠamajováCentre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů, 2778371 Olomouc, Czech Republic. olga.samajova@upol.cz.
Pavol VadovičCentre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů, 2778371 Olomouc, Czech Republic. pavol.vadovic@upol.cz.ORCID 0000-0003-0579-3487
Tibor PechanInstitute for Genomics, Biocomputing & Biotechnology, Mississippi Agricultural and Forestry Experiment Station, Mississippi State University, Starkville, MS 39759, USA. pechan@ra.msstate.edu.
Jozef ŠamajCentre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů, 2778371 Olomouc, Czech Republic. jozef.samaj@upol.cz.
Palacký University Olomouc · CZMississippi State University · US

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
Grantová Agentura České Republiky 16-22044SNational Institutes of Health USM-GR05802-03NIGMS NIH HHS P20 GM103476U.S. Department of Agriculture 58-6066-6-059
6 · The paper itself

Abstract

Phospholipase Dα1 (PLDα1) belongs to phospholipases, a large phospholipid hydrolyzing protein family. PLDα1 has a substrate preference for phosphatidylcholine leading to enzymatic production of phosphatidic acid, a lipid second messenger with multiple cellular functions. PLDα1 itself is implicated in biotic and abiotic stress responses. Here, we present a shot-gun differential proteomic analysis on roots of two Arabidopsis

Indexed as

ProteomicsArabidopsisArabidopsis ProteinsChromatography, High Pressure LiquidEndocytosisGene OntologyGlucosinolatesMitochondrial ProteinsPhospholipase DPlant RootsProtein TransportProteomeSynaptotagmin ITandem Mass SpectrometryUncoupling Protein 1Arabidopsis ProteinsAt2g20990 protein, ArabidopsisGlucosinolatesMitochondrial ProteinsPhospholipase DPLDA1 protein, ArabidopsisProteomeSynaptotagmin IUncoupling Protein 1Arabidopsiscytoskeletonmitochondrial protein importphospholipase D alpha1proteomicsquality controlvesicular transport

Identifiers

PMID30587782
PMCPMC6337374
OpenAlexW2903179205

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.