Evidence map›Paper›PMID 30587240›Full record

ArticleClinical epigenetics2018

Analysis of repeated leukocyte DNA methylation assessments reveals persistent epigenetic alterations after an incident myocardial infarction.

Cavin K Ward-Caviness, Golareh Agha, Brian H Chen, Liliane Pfeiffer, Rory Wilson, Petra Wolf, Christian Gieger, Joel Schwartz, Pantel S Vokonas, Lifang Hou and 11 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 3 countries.

Cavin K Ward-CavinessInstitute of Epidemiology II, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany. ward-caviness.cavin@epa.gov.ORCID 0000-0002-6322-4349
Golareh AghaMailman School of Public Health, Columbia University, 722 W 168th St, New York, NY, 10032, USA.
Brian H ChenLongitudinal Studies Section, Translational Gerontology Branch, Intramural Research Program, National Institute on Aging, National Institutes of Health, Baltimore, MD, 21224, USA.
Liliane PfeifferResearch Unit Molecular Epidemiology, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Rory WilsonResearch Unit Molecular Epidemiology, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Petra WolfInstitute of Human Genetics, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Christian GiegerResearch Unit Molecular Epidemiology, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Joel SchwartzDepartment of Epidemiology, Harvard T.H. Chan School of Public Health, 677 Huntington Ave, Boston, MA, 02115, USA.
Pantel S VokonasVA Normative Aging Study, Veterans Affairs Boston Healthcare System and the Department of Medicine, Boston University School of Medicine, Boston, MA, USA.
Lifang HouDepartment of Preventive Medicine, Feinberg School of Medicine, Northwestern University, 680 N Lake Shore Dr, Chicago, IL, 60611, USA.
Allan C JustDepartment of Preventive Medicine, Icahn School of Medicine at Mount Sinai, 1468 Madison Ave, New York, NY, 10029, USA.
Stefania BandinelliGeriatric Rehabilitation Unit, Azienda Sanitaria Firenze, Via del Cassero 19, San Casciano in Val di pesa, 50026, Florence, Italy.
Dena G HernandezLaboratory of Neurogenetics, Intramural Research Program, National Institute on Aging, National Institutes of Health, Bethesda, MD, 20814, USA.
Andrew B SingletonLaboratory of Neurogenetics, Intramural Research Program, National Institute on Aging, National Institutes of Health, Bethesda, MD, 20814, USA.
Holger ProkischInstitute of Human Genetics, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Thomas MeitingerInstitute of Human Genetics, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Gabi KastenmüllerInstitute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Luigi FerrucciLongitudinal Studies Section, Translational Gerontology Branch, Intramural Research Program, National Institute on Aging, National Institutes of Health, Baltimore, MD, 21224, USA.
Andrea A BaccarelliMailman School of Public Health, Columbia University, 722 W 168th St, New York, NY, 10032, USA.
Melanie WaldenbergerResearch Unit Molecular Epidemiology, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Annette PetersInstitute of Epidemiology II, Helmholtz Zentrum München, Ingolstädter Landstraβe 1, 85764, Neuherberg, Germany.
Helmholtz Zentrum München · DENational Institutes of Health · USColumbia University · USAzienda Sanitaria di Firenze · ITBoston University · USHarvard University · USIcahn School of Medicine at Mount Sinai · USNorthwestern University · US

Funding

The Mount Sinai Transdisciplinary Center on Early Environmental ExposuresP30ES023515 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Chris Gennings · 2014 to 2026
$21.3M
Characterization of Normal Genomic VariabilityZIAAG000932 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2009 to 2024
$11.3M
HISPANIC SECONDARY STROKE PREVENTION INITIATIVER01MD009164 · NIMHD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI CARRASQUILLO, OLVEEN · 2014 to 2018
$1.9M
Prenatal Exposure to Endocrine Disrupters, DNA Methylation, and Childhood ObesityR00ES023450 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI JUST, ALLAN C. · 2016 to 2018
$747k
NIEHS NIH HHS P30 ES023515NIEHS NIH HHS R00 ES023450NIMHD NIH HHS R01 MD009164
6 · The paper itself

Abstract

backgroundMost research into myocardial infarctions (MIs) have focused on preventative efforts. For survivors, the occurrence of an MI represents a major clinical event that can have long-lasting consequences. There has been little to no research into the molecular changes that can occur as a result of an incident MI. Here, we use three cohorts to identify epigenetic changes that are indicative of an incident MI and their association with gene expression and metabolomics.

resultsUsing paired samples from the KORA cohort, we screened for DNA methylation loci (CpGs) whose change in methylation is potentially indicative of the occurrence of an incident MI between the baseline and follow-up exams. We used paired samples from the NAS cohort to identify 11 CpGs which were predictive in an independent cohort. After removing two CpGs associated with medication usage, we were left with an "epigenetic fingerprint" of MI composed of nine CpGs. We tested this fingerprint in the InCHIANTI cohort where it moderately discriminated incident MI occurrence (AUC = 0.61, P = 6.5 × 10

conclusionsThere are significant changes in DNA methylation after an incident MI. Nine of these CpGs show consistent changes in multiple cohorts, significantly discriminate MI in independent cohorts, and were independent of medication usage. Integration with gene expression and metabolomics data indicates a link between MI-associated epigenetic changes and BCAA metabolism.

Indexed as

DNA MethylationAgedCpG IslandsEpigenesis, GeneticFemaleGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansLeukocytesMaleMetabolomicsMiddle AgedMyocardial InfarctionBranched chain amino acid metabolismDNA methylationEpigenetic fingerprintEpigeneticsFingerprintMetabolitesMyocardial infarctionSystems biology

Identifiers

PMID30587240
PMCPMC6307146
OpenAlexW2905727269

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.