Evidence map›Paper›PMID 30586438›Full record

ArticlePloS one2018

Establishment of a conditional TALEN system using the translational enhancer dMac3 and an inducible promoter activated by glucocorticoid treatment to increase the frequency of targeted mutagenesis in plants.

Hitomi Onodera, Saeko Shingu, Mariko Ohnuma, Takaaki Horie, Miho Kihira, Hiroaki Kusano, Hiroshi Teramura, Hiroaki Shimada

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Hitomi OnoderaDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Saeko ShinguDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Mariko OhnumaDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Takaaki HorieDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Miho KihiraDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Hiroaki KusanoDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Hiroshi TeramuraDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.
Hiroaki ShimadaDepartment of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan.ORCID 0000-0001-9304-3293
Tokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription activator-like effector nuclease (TALEN) is an artificial nuclease that causes DNA cleavage at the target site and induces few off-target reactions because of its high sequence specificity. Powerful and variable tools using TALENs can be used in practical applications and may facilitate the molecular breeding of many plant species. We have developed a convenient construction system for a plant TALEN vector named the Emerald Gateway TALEN system. In this study, we added new properties to this system, which led to an increase in the efficiency of targeted mutagenesis. Rice dMac3 is a translational enhancer that highly increases the efficiency of translation of the downstream ORF. We inserted dMac3 into the 5' untranslated region of the TALEN gene. In the cultured rice cells to which the TALEN gene was introduced, the frequency of targeted mutagenesis was highly increased compared with those altered using the conventional system. Next, the promoter for the TALEN gene was replaced with iPromoter, and its expression was stringently controlled by a GVG transcription factor that was activated in the presence of glucocorticoid. This conditional expression system worked effectively and led to a higher frequency of targeted mutagenesis than that by the constitutive expression system, while no mutagenesis was detected without glucocorticoid treatment. These results suggest that our system can be applied to genome editing to create the desired mutation.

Indexed as

Gene EditingGenetic VectorsMutagenesisMutationOryzaPlants, Genetically ModifiedRegulatory Sequences, Nucleic AcidTranscription Activator-Like Effector NucleasesTranscription Activator-Like Effector Nucleases

Identifiers

PMID30586438
PMCPMC6306166
OpenAlexW2906614018

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.