Evidence map›Paper›PMID 30582769›Full record

ArticlePlant biotechnology journal2019

OsACL-A2 negatively regulates cell death and disease resistance in rice.

Banpu Ruan, Zhihua Hua, Juan Zhao, Bin Zhang, Deyong Ren, Chaolei Liu, Shenglong Yang, Anpeng Zhang, Hongzhen Jiang, Haiping Yu and 10 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 97 citations in OpenAlex.

  1. Pooled it
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  12. Characterization of theInternational journal of molecular sciences · 2024
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  13. Article
  14. Rice breeding for low input agriculture.Frontiers in plant science · 2024
    Review
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  20. Isolation and Characterization ofPlants (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 2 countries.

Banpu RuanState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Zhihua HuaDepartment of Environmental and Plant Biology, Interdisciplinary Program in Molecular and Cellular Biology, Ohio University, Athens, OH, USA.
Juan ZhaoState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Bin ZhangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Deyong RenState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Chaolei LiuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Shenglong YangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Anpeng ZhangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Hongzhen JiangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Haiping YuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Jiang HuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Li ZhuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Guang ChenState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Lan ShenState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Guojun DongState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Guangheng ZhangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Dali ZengState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Longbiao GuoState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Qian QianState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.
Zhenyu GaoState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang, China.ORCID 0000-0003-4808-2511
China National Rice Research Institute · CNOhio University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ATP-citrate lyases (ACL) play critical roles in tumour cell propagation, foetal development and growth, and histone acetylation in human and animals. Here, we report a novel function of ACL in cell death-mediated pathogen defence responses in rice. Using ethyl methanesulphonate (EMS) mutagenesis and map-based cloning, we identified an Oryza sativa ACL-A2 mutant allele, termed spotted leaf 30-1 (spl30-1), in which an A-to-T transversion converts an Asn at position 343 to a Tyr (N343Y), causing a recessive mutation that led to a lesion mimic phenotype. Compared to wild-type plants, spl30-1 significantly reduces ACL enzymatic activity, accumulates high reactive oxygen species and increases degradation rate of nuclear deoxyribonucleic acids. CRISPR/Cas9-mediated insertion/deletion mutation analysis and complementation assay confirmed that the phenotype of spl30-1 resulted from the defective function of OsACL-A2 protein. We further biochemically identified that the N343Y mutation caused a significant degradation of SPL30

Indexed as

Cell DeathDisease ResistanceATP Citrate (pro-S)-LyaseGene Expression Regulation, PlantMutationOryzaPhenotypePlant ImmunityPlant LeavesPlant ProteinsProteasome Endopeptidase ComplexUbiquitinATP Citrate (pro-S)-LyaseATP dependent 26S proteasePlant ProteinsProteasome Endopeptidase ComplexUbiquitincell deathdisease resistanceOsACL-A2OsSLriceSPL30

Identifiers

PMID30582769
PMCPMC6576086
OpenAlexW2906162902

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.