Evidence map›Paper›PMID 30582698›Full record

ArticleJournal of proteome research2019

Glycoproteomic Analysis of MGL-Binding Proteins on Acute T-Cell Leukemia Cells.

Martina Pirro, Esmee Schoof, Sandra J van Vliet, Yoann Rombouts, Alexandre Stella, Arnoud de Ru, Yassene Mohammed, Manfred Wuhrer, Peter A van Veelen, Paul J Hensbergen

Open access · hybridAbstract read
In one paragraph

Article in Journal of proteome research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

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  11. International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Martina PirroCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.ORCID 0000-0001-9562-2395
Esmee SchoofCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.
Sandra J van VlietAmsterdam UMC, Vrije Universiteit Amsterdam, Dept. of Molecular Cell Biology and Immunology, Cancer Center Amsterdam, Amsterdam Infection & Immunity Institute, 1007 MB Amsterdam , The Netherlands.ORCID 0000-0003-1811-2687
Yoann RomboutsInstitut de Pharmacologie et de Biologie Structurale , Université de Toulouse, CNRS, UPS , Toulouse 31062 , France.ORCID 0000-0003-4482-2199
Alexandre StellaInstitut de Pharmacologie et de Biologie Structurale , Université de Toulouse, CNRS, UPS , Toulouse 31062 , France.
Arnoud de RuCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.
Yassene MohammedCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.ORCID 0000-0003-3265-3332
Manfred WuhrerCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.ORCID 0000-0002-0814-4995
Peter A van VeelenCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.
Paul J HensbergenCenter for Proteomics and Metabolomics , Leiden University Medical Center , 2300 RC Leiden , The Netherlands.ORCID 0000-0002-3193-5445
Leiden University Medical Center · NLCentre National de la Recherche Scientifique · FRAmsterdam University Medical Centers · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

C-type lectins are a diverse group of proteins involved in many human physiological and pathological processes. Most C-type lectins are glycan-binding proteins, some of which are pivotal for innate immune responses against pathogens. Other C-type lectins, such as the macrophage galactose-type lectin (MGL), have been shown to induce immunosuppressive responses upon the recognition of aberrant glycosylation on cancer cells. MGL is known to recognize terminal N-acetylgalactosamine (GalNAc), such as the Tn antigen, which is commonly found on malignant cells. Even though this glycan specificity of MGL is well described, there is a lack of understanding of the actual glycoproteins that bind MGL. We present a glycoproteomic workflow for the identification of MGL-binding proteins, which we applied to study MGL ligands on the human Jurkat leukemia cell line. In addition to the known MGL ligands and Tn antigen-carrying proteins CD43 and CD45 on these cells, we have identified a set of novel cell-surface ligands for MGL. Importantly, for several of these, O-glycosylation has hitherto not been described. Altogether, our data provide new insight into the identification and structure of novel MGL ligands that presumably act as modulatory molecules in cancer immune responses.

Indexed as

AcetylgalactosamineAntigens, Tumor-Associated, CarbohydrateCarrier ProteinsGlycoproteinsGlycosylationHumansImmunity, InnateJurkat CellsLectins, C-TypeLeukocyte Common AntigensLeukosialinLigandsPrecursor T-Cell Lymphoblastic Leukemia-LymphomaAcetylgalactosamineAntigens, Tumor-Associated, CarbohydrateCarrier ProteinsGlycoproteinsLectins, C-TypeLeukocyte Common AntigensLeukosialinLigandsMGL lectin, humanTn antigenglycoproteomicslectinleukemiaO-glycosylationTn antigen

Identifiers

PMID30582698
PMCPMC6399673
OpenAlexW2906153915

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.