ArticleFrontiers in plant science2018
Evaluation and Recommendations for Routine Genotyping Using Skim Whole Genome Re-sequencing in Canola.
Article in Frontiers in plant science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.
What it found
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The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
21 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-analysis of GWAS in canola blackleg (Leptosphaeria maculans) disease traits demonstrates increased power from imputed whole-genome sequence.Scientific reports · 2020Pooled it
- Enhanced disease resistance in chickpea and canola via MAGPIE: Major-Effect Allele and Genomic Polygenic Integration for Enhancement.The plant genome · 2026Article
- Article
- Genomic structural variation rescues a classic biological invader from a population bottleneck.Science advances · 2026Article
- Skim-sequencing for genomic selection in wheat: a comparison of marker platforms.The plant genome · 2026Article
- A low-coverage skim-sequencing and imputation pipeline for genomic selection.The plant genome · 2025Article
- Resequencing and phenotyping of the first highly inbred eggplant multiparent population revealHorticulture research · 2025Article
- Benchmarking of low coverage sequencing workflows for precision genotyping in eggplant.BMC plant biology · 2025Article
- Using genotype imputation to integrate Canola populations for genome-wide association and genomic prediction of blackleg resistance.BMC genomics · 2025Article
- Skim resequencing finely maps the downy mildew resistance lociHorticulture research · 2023Article
- Discovery and genome-guided mapping ofHorticulture research · 2023Article
- Genomic architecture of migration timing in a long-distance migratory songbird.Scientific reports · 2023Article
- Development of the Wheat Practical Haplotype Graph database as a resource for genotyping data storage and genotype imputation.G3 (Bethesda, Md.) · 2022Article
- Mapping and selection of downy mildew resistance in spinach cv. whale by low coverage whole genome sequencing.Frontiers in plant science · 2022Article
- Construction of ultra-high-density genetic linkage map of a sorghum-sudangrass hybrid using whole genome resequencing.PloS one · 2022Article
- Impact of genotypic errors with equal and unequal family contribution on accuracy of genomic prediction in aquaculture using simulation.Scientific reports · 2021Article
- Linkage mapping and QTL analysis of flowering time using ddRAD sequencing with genotype error correction in Brassica napus.BMC plant biology · 2020Article
- Review
- Evaluation of variant calling tools for large plant genome re-sequencing.BMC bioinformatics · 2020Article
- Construction of a High-Density Genetic Map and Mapping of Firmness in Grapes (International journal of molecular sciences · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Whole genome sequencing offers genome wide, unbiased markers, and inexpensive library preparation. With the cost of sequencing decreasing rapidly, many plant genomes of modest size are amenable to skim whole genome resequencing (skim WGR). The use of skim WGR in diverse sample sets without the use of imputation was evaluated
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.