Evidence map›Paper›PMID 30580923›Full record

ArticleBiophysical journal2019

Biophysical Parameters of the Sec14 Phospholipid Exchange Cycle.

Taichi Sugiura, Chisato Takahashi, Yusuke Chuma, Masakazu Fukuda, Makiko Yamada, Ukyo Yoshida, Hiroyuki Nakao, Keisuke Ikeda, Danish Khan, Aaron H Nile and 2 more

Abstract read
In one paragraph

Article in Biophysical journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Reconstitution of ORP-mediated lipid exchange coupled to PI4P metabolism.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Regulation of phosphoinositide metabolism in Apicomplexan parasites.Frontiers in cell and developmental biology · 2023
    Review
  7. Article
  8. The Fast and the Furious: Golgi Contact Sites.Contact (Thousand Oaks (Ventura County, Calif.)) · 2021
    Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Taichi SugiuraGraduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Chisato TakahashiGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, Japan.
Yusuke ChumaGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, Japan.
Masakazu FukudaGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, Japan.
Makiko YamadaGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, Japan.
Ukyo YoshidaGraduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Hiroyuki NakaoGraduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Keisuke IkedaGraduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Danish KhanDepartments of Biochemistry and Biophysics, Texas A&M University, College Station, Texas.
Aaron H NileDepartment of Molecular & Cellular Medicine, Texas A&M Health Sciences Center, College Station, Texas.
Vytas A BankaitisDepartments of Biochemistry and Biophysics, Texas A&M University, College Station, Texas; Department of Molecular & Cellular Medicine, Texas A&M Health Sciences Center, College Station, Texas.
Minoru NakanoGraduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan. Electronic address: mnakano@pha.u-toyama.ac.jp.

Funding

Role of the Phospholipids in Golgi Secretory FunctionR01GM044530 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BANKAITIS, VYTAS A · 1991 to 2019
$5.6M
The Biology and Biochemistry of Lipid Transfer Protein-Regulated Phosphoinositide SignalingR35GM131804 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI Vytas A Bankaitis · 2019 to 2026
$4.5M
NIGMS NIH HHS R01 GM044530NIGMS NIH HHS R35 GM131804
6 · The paper itself

Abstract

Sec14, the major yeast phosphatidylcholine (PC)/phosphatidylinositol (PI) transfer protein (PITP), coordinates PC and PI metabolism to facilitate an appropriate and essential lipid signaling environment for membrane trafficking from trans-Golgi membranes. The Sec14 PI/PC exchange cycle is essential for its essential biological activity, but fundamental aspects of how this PITP executes its lipid transfer cycle remain unknown. To address some of these outstanding issues, we applied time-resolved small-angle neutron scattering for the determination of protein-mediated intervesicular movement of deuterated and hydrogenated phospholipids in vitro. Quantitative analysis by small-angle neutron scattering revealed that Sec14 PI- and PC-exchange activities were sensitive to both the lipid composition and curvature of membranes. Moreover, we report that these two parameters regulate lipid exchange activity via distinct mechanisms. Increased membrane curvature promoted both membrane binding and lipid exchange properties of Sec14, indicating that this PITP preferentially acts on the membrane site with a convexly curved face. This biophysical property likely constitutes part of a mechanism by which spatial specificity of Sec14 function is determined in cells. Finally, wild-type Sec14, but not a mixture of Sec14 proteins specifically deficient in either PC- or PI-binding activity, was able to effect a net transfer of PI or PC down opposing concentration gradients in vitro.

Indexed as

Neutron DiffractionPhosphatidylcholinesPhosphatidylinositolsPhospholipid Transfer ProteinsProtein BindingSaccharomyces cerevisiae ProteinsScattering, Small AngleUnilamellar LiposomesPhosphatidylcholinesPhosphatidylinositolsPhospholipid Transfer ProteinsSaccharomyces cerevisiae ProteinsSEC14 protein, S cerevisiaeUnilamellar Liposomes

Identifiers

PMID30580923
PMCPMC6342728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.