Evidence map›Paper›PMID 30580520›Full record

ArticleJournal of the American Chemical Society2019

Mimicking Microbial Rhodopsin Isomerization in a Single Crystal.

Alireza Ghanbarpour, Muath Nairat, Meisam Nosrati, Elizabeth M Santos, Chrysoula Vasileiou, Marcos Dantus, Babak Borhan, James H Geiger

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Photoisomerization detected in a fully wavelength-tunable rhodopsin mimic system.Acta crystallographica. Section D, Structural biology · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Alireza GhanbarpourMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Muath NairatMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Meisam NosratiMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Elizabeth M SantosMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Chrysoula VasileiouMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Marcos DantusMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Babak BorhanMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.ORCID 0000-0002-3193-0732
James H GeigerMichigan State University , Department of Chemistry , East Lansing , Michigan 48824 , United States.
Michigan State University · US

Funding

Protein/Chromphore Interactions via Protein Design: Interrogation and ApplicationR01GM101353 · NIGMS · MICHIGAN STATE UNIVERSITY · PI BORHAN, BABAK, GEIGER, JAMES H · 2013 to 2022
$2.6M
NIGMS NIH HHS R01 GM101353
6 · The paper itself

Abstract

Bacteriorhodopsin represents the simplest, and possibly most abundant, phototropic system requiring only a retinal-bound transmembrane protein to convert photons of light to an energy-generating proton gradient. The creation and interrogation of a microbial rhodopsin mimic, based on an orthogonal protein system, would illuminate the design elements required to generate new photoactive proteins with novel function. We describe a microbial rhodopsin mimic, created using a small soluble protein as a template, that specifically photoisomerizes all- trans to 13- cis retinal followed by thermal relaxation to the all- trans isomer, mimicking the bacteriorhodopsin photocycle, in a single crystal. The key element for selective isomerization is a tuned steric interaction between the chromophore and protein, similar to that seen in the microbial rhodopsins. It is further demonstrated that a single mutation converts the system to a protein photoswitch without chromophore photoisomerization or conformational change.

Indexed as

BiomimeticsBacteriorhodopsinsLightModels, MolecularMovementProtein ConformationStereoisomerismTemperatureBacteriorhodopsins

Identifiers

PMID30580520
PMCPMC7358036
OpenAlexW2906188130

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.