Evidence map›Paper›PMID 30578468›Full record

ArticleRice (New York, N.Y.)2018

Reduction in sucrose contents by downregulation of fructose-1,6-bisphosphatase 2 causes tiller outgrowth cessation in rice mutants lacking glutamine synthetase1;2.

Miwa Ohashi, Keiki Ishiyama, Miyako Kusano, Atsushi Fukushima, Soichi Kojima, Toshihiko Hayakawa, Tomoyuki Yamaya

Abstract read
In one paragraph

Article in Rice (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  6. Article
  7. New Insight into Aspartate Metabolic Pathways inInternational journal of molecular sciences · 2022
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Miwa OhashiGraduate School of Agricultural Science, Tohoku University, 468-1 Aoba, Aramaki-Aza, Aoba-ku, Sendai, 980-8572, Japan. ohashi@agr.nagoya-u.ac.jp.ORCID http://orcid.org/0000-0002-3862-3073
Keiki IshiyamaGraduate School of Agricultural Science, Tohoku University, 468-1 Aoba, Aramaki-Aza, Aoba-ku, Sendai, 980-8572, Japan.
Miyako KusanoGraduate School of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8577, Japan.
Atsushi FukushimaRIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan.
Soichi KojimaGraduate School of Agricultural Science, Tohoku University, 468-1 Aoba, Aramaki-Aza, Aoba-ku, Sendai, 980-8572, Japan.
Toshihiko HayakawaGraduate School of Agricultural Science, Tohoku University, 468-1 Aoba, Aramaki-Aza, Aoba-ku, Sendai, 980-8572, Japan.
Tomoyuki YamayaGraduate School of Agricultural Science, Tohoku University, 468-1 Aoba, Aramaki-Aza, Aoba-ku, Sendai, 980-8572, Japan.

Funding

Japan Society for the Promotion of Science 15H04468Japan Society for the Promotion of Science 15K14674Japan Society for the Promotion of Science 16J01799Japan Society for the Promotion of Science 17H03780Japan Society for the Promotion of Science 26450073Ministry of Education, Culture, Sports, Science and Technology 22119003
6 · The paper itself

Abstract

backgroundOur previous transcriptomic analysis revealed that downregulation of nitrogen and carbon metabolism in the basal portions of the shoots inhibited cytosolic glutamine synthetase1;2 (GS1;2), which severely reduced rice tiller number. In the present study, we used rice mutants lacking GS1;2 (gs1;2 mutants) to determine the contribution of carbon metabolism to tiller growth.

resultsMetabolomic analysis indicated the effects of carbon metabolism disorder such as reductions in the levels of sugar metabolites (e.g., sucrose and glucose 6-phosphate) in the shoot basal portions of the gs1;2 mutant seedlings. Decrease in sucrose caused by the lack of GS1;2 was successfully restored to the wild-type levels by introducing OsGS1;2 cDNA into the mutants. In the basal portions of the shoots, the lack of GS1;2 caused low expression of cytosolic fructose 1,6-bisphosphatase2 (OscFBP2), which is a key cytosolic sucrose synthesis enzyme; it is especially important in the phloem companion cells of the nodal vascular anastomoses. NH

conclusionsMetabolomic analysis revealed that the lack of GS1;2 reduced sucrose metabolism in the basal portions of the shoots. Our results indicated that sucrose reduction was caused by the downregulation of OscFBP2 expression in the basal portions of the gs1;2 mutant shoots. The reduction in sucrose content caused by the lack of cFBPase2 resulted in lower tiller number at the early growth stage. Therefore, adequate sucrose supply via cFBPase2 may be necessary for tiller growth in the basal portions of rice shoots.

Indexed as

AmmoniumCytosolic fructose-1,6-bisphosphataseCytosolic glutamine synthetaseOryza sativa L.RiceSucroseTiller

Identifiers

PMID30578468
PMCPMC6303225

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.