Evidence map›Paper›PMID 30577806›Full record

ArticleBMC plant biology2018

PISTILLATA paralogs in Tarenaya hassleriana have diverged in interaction specificity.

Suzanne de Bruijn, Tao Zhao, Jose M Muiño, Eric M Schranz, Gerco C Angenent, Kerstin Kaufmann

Abstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Suzanne de BruijnLaboratory of Molecular Biology, Wageningen University, Droevendaalsesteeg 1, 6708, PB, Wageningen, The Netherlands. suzanne.de-bruijn@jic.ac.uk.ORCID http://orcid.org/0000-0002-7429-0448
Tao ZhaoBiosystematics Group, Wageningen University, Droevendaalsesteeg 1, 6708, PB, Wageningen, The Netherlands.
Jose M MuiñoInstitute for Biology, Systems Biology of Gene Regulation, Humboldt-Universität zu Berlin, Berlin, Germany.
Eric M SchranzBiosystematics Group, Wageningen University, Droevendaalsesteeg 1, 6708, PB, Wageningen, The Netherlands.
Gerco C AngenentLaboratory of Molecular Biology, Wageningen University, Droevendaalsesteeg 1, 6708, PB, Wageningen, The Netherlands.
Kerstin KaufmannInstitute for Biology, Plant Cell and Molecular Biology, Humboldt-Universität zu Berlin, Philippstraße 13, 10115, Berlin, Germany. kerstin.kaufmann@hu-berlin.de.

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek Msc talent programme
6 · The paper itself

Abstract

backgroundFloral organs are specified by MADS-domain transcription factors that act in a combinatorial manner, as summarized in the (A)BCE model. However, this evolutionarily conserved model is in contrast to a remarkable amount of morphological diversity in flowers. One of the mechanisms suggested to contribute to this diversity is duplication of floral MADS-domain transcription factors. Although gene duplication is often followed by loss of one of the copies, sometimes both copies are retained. If both copies are retained they will initially be redundant, providing freedom for one of the paralogs to change function. Here, we examine the evolutionary fate and functional consequences of a transposition event at the base of the Brassicales that resulted in the duplication of the floral regulator PISTILLATA (PI), using Tarenaya hassleriana (Cleomaceae) as a model system.

resultsThe transposition of a genomic region containing a PI gene led to two paralogs which are located at different positions in the genome. The original PI copy is syntenic in position with most angiosperms, whereas the transposed copy is syntenic with the PI genes in Brassicaceae. The two PI paralogs of T. hassleriana have very similar expression patterns. However, they may have diverged in function, as only one of these PI proteins was able to act heterologously in the first whorl of A. thaliana flowers. We also observed differences in protein complex formation between the two paralogs, and the two paralogs exhibit subtle differences in DNA-binding specificity. Sequence analysis indicates that most of the protein sequence divergence between the two T. hassleriana paralogs emerged in a common ancestor of the Cleomaceae and the Brassicaceae.

conclusionsWe found that the PI paralogs in T. hassleriana have similar expression patterns, but may have diverged at the level of protein function. Data suggest that most protein sequence divergence occurred rapidly, prior to the origin of the Brassicaceae and Cleomaceae. It is tempting to speculate that the interaction specificities of the Brassicaceae-specific PI proteins are different compared to the PI found in other angiosperms. This could lead to PI regulating partly different genes in the Brassicaceae, and ultimately might result in change floral in morphology.

Indexed as

ArabidopsisBrassicaceaeCleomeFlowersGene DuplicationGene Expression Regulation, PlantGenes, PlantGenetic VariationMADS Domain ProteinsPhylogenyPlant ProteinsSequence AlignmentMADS Domain ProteinsPlant ProteinsCleomaceaeFlower developmentGene duplicationsMADSParalogsPISTILLATATarenaya

Identifiers

PMID30577806
PMCPMC6303913

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.