Evidence map›Paper›PMID 30576538›Full record

ArticleThe Journal of infectious diseases2019

An Intensive, Active Surveillance Reveals Continuous Invasion and High Diversity of Rhinovirus in Households.

Everlyn Kamau, Clayton O Onyango, Grieven P Otieno, Patience K Kiyuka, Charles N Agoti, Graham F Medley, Patricia A Cane, D James Nokes, Patrick K Munywoki

Open access · hybridAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Everlyn KamauEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Clayton O OnyangoEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Grieven P OtienoEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Patience K KiyukaEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Charles N AgotiEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Graham F MedleyCentre for Mathematical Modelling of Infectious Disease and Department of Global Health and Development, London School of Hygiene and Tropical Medicine, Salisbury.
Patricia A CanePublic Health England, Salisbury.
D James NokesEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Patrick K MunywokiEpidemiology and Demography Department, Kenya Medical Research Institute - Wellcome Trust Research Programme, Kilifi.
Kenya Medical Research Institute · KEPwani University · KELondon School of Hygiene & Tropical Medicine · GBPublic Health England · GBUniversity of Warwick · GB

Funding

Wellcome TrustWellcome Trust 090853Wellcome Trust 102975Wellcome Trust 203077
6 · The paper itself

Abstract

We report on infection patterns in 5 households (78 participants) delineating the natural history of human rhinovirus (HRV). Nasopharyngeal collections were obtained every 3-4 days irrespective of symptoms, over a 6-month period, with molecular screening for HRV and typing by sequencing VP4/VP2 junction. Overall, 311/3468 (8.9%) collections were HRV positive: 256 were classified into 3 species: 104 (40.6%) HRV-A; 14 (5.5%) HRV-B, and 138 (53.9%) HRV-C. Twenty-six known HRV types (13 HRV-A, 3 HRV-B, and 10 HRV-C) were identified (A75, C1, and C35 being most frequent). We observed continuous invasion and temporal clustering of HRV types in households (range 5-13 over 6 months). Intrahousehold transmission was independent of clinical status but influenced by age. Most (89.0%) of HRV infection episodes were limited to <14 days. Individual repeat infections were frequent (range 1-7 over 6 months), decreasing with age, and almost invariably heterotypic, indicative of lasting type-specific immunity and low cross-type protection.

Indexed as

AdolescentAdultAge FactorsChildChild, PreschoolCommon ColdFamily CharacteristicsHumansInfantKenyaNasopharynxPicornaviridae InfectionsProspective StudiesReal-Time Polymerase Chain ReactionRecurrenceRhinovirusdeveloping countrieshouseholdKenyarhinovirustransmission

Identifiers

PMID30576538
PMCPMC6420174
OpenAlexW2906464981

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.