Evidence map›Paper›PMID 30573668›Full record

ArticleThe EMBO journal2019

Parkin inhibits BAK and BAX apoptotic function by distinct mechanisms during mitophagy.

Jonathan P Bernardini, Jason M Brouwer, Iris Kl Tan, Jarrod J Sandow, Shuai Huang, Che A Stafford, Aleksandra Bankovacki, Christopher D Riffkin, Ahmad Z Wardak, Peter E Czabotar and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 110 citations in OpenAlex.

  1. Article
  2. Review
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  9. Article
  10. A new era in cancer therapy: targeting the Proteasome-Bcl-2 axis.Journal of experimental & clinical cancer research : CR · 2025
    Review
  11. Article
  12. Review
  13. Article
  14. Mitochondria - the CEO of the cell.Journal of cell science · 2025
    Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Mitochondria and cell death.Nature cell biology · 2024
    Review
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jonathan P BernardiniWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Jason M BrouwerWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Iris Kl TanWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Jarrod J SandowWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Shuai HuangWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Che A StaffordWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Aleksandra BankovackiWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Christopher D RiffkinWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Ahmad Z WardakWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Peter E CzabotarWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia.
Michael LazarouDepartment of Biochemistry and Molecular Biology, Monash Biomedicine Discovery Institute Monash University, Clayton, Melbourne, Vic., Australia.ORCID 0000-0003-2150-5545
Grant DewsonWalter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, Vic., Australia dewson@wehi.edu.au.ORCID 0000-0003-4251-8898
The University of Melbourne · AUWalter and Eliza Hall Institute of Medical Research · AUAustralian Regenerative Medicine Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The E3 ubiquitin ligase Parkin is a key effector of the removal of damaged mitochondria by mitophagy. Parkin determines cell fate in response to mitochondrial damage, with its loss promoting early onset Parkinson's disease and potentially also cancer progression. Controlling a cell's apoptotic response is essential to co-ordinate the removal of damaged mitochondria. We report that following mitochondrial damage-induced mitophagy, Parkin directly ubiquitinates the apoptotic effector protein BAK at a conserved lysine in its hydrophobic groove, a region that is crucial for BAK activation by BH3-only proteins and its homo-dimerisation during apoptosis. Ubiquitination inhibited BAK activity by impairing its activation and the formation of lethal BAK oligomers. Parkin also suppresses BAX-mediated apoptosis, but in the absence of BAX ubiquitination suggesting an indirect mechanism. In addition, we find that BAK-dependent mitochondrial outer membrane permeabilisation during apoptosis promotes PINK1-dependent Parkin activation. Hence, we propose that Parkin directly inhibits BAK to suppress errant apoptosis, thereby allowing the effective clearance of damaged mitochondria, but also promotes clearance of apoptotic mitochondria to limit their potential pro-inflammatory effect.

Indexed as

AnimalsApoptosisbcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinCell LineHEK293 CellsHeLa CellsHumansLysineMiceMitochondriaMitophagyUbiquitinationUbiquitin-Protein LigasesBAK1 protein, humanBAX protein, humanbcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinLysineparkin proteinUbiquitin-Protein LigasesapoptosisBAKBAXmitophagyParkin

Identifiers

PMID30573668
PMCPMC6331729
OpenAlexW2906265323

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.