Evidence map›Paper›PMID 30572883›Full record

ArticleMolecular cancer2018

Alteration of tumor suppressor BMP5 in sporadic colorectal cancer: a genomic and transcriptomic profiling based study.

Erfei Chen, Fangfang Yang, Hongjuan He, Qiqi Li, Wei Zhang, Jinliang Xing, Ziqing Zhu, Jingjing Jiang, Hua Wang, Xiaojuan Zhao and 11 more

Abstract read
In one paragraph

Article in Molecular cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. TGF-β Pathway-Based Polygenic Risk Score Modifies the Association between Red Meat Intake and Colorectal Cancer Risk: Application of a Novel Pathway-Based PRS Method.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2026
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  13. BMP signaling in cancer stemness and differentiation.Cell regeneration (London, England) · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Erfei ChenInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Fangfang YangInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Hongjuan HeInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Qiqi LiInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Wei ZhangDepartment of Pathology, The Helmholtz Sino-German Laboratory for Cancer Research, Tangdu Hospital, the Fourth Military Medical University, Xian, 710038, China.
Jinliang XingState Key Laboratory of Cancer Biology and Experimental Teaching Center of Basic Medicine, Fourth Military Medical University, Xian, China.
Ziqing ZhuInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Jingjing JiangInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Hua WangInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Xiaojuan ZhaoInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Ruitao LiuInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Lei LeiInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Jing DongInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Yuchen PeiInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Ying YangInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Junqiang PanInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Pan ZhangInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Shuzhen LiuInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Le DuInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Yuan ZengInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.
Jin YangInstitute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China. yangjin@nwu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAlthough the genetic spectrum of human colorectal cancer (CRC) is mainly characterized by APC, KRAS and TP53 mutations, driver genes in tumor initiation have not been conclusively demonstrated. In this study, we aimed to identify novel markers for CRC.

methodsWe performed exome analysis of sporadic colorectal cancer (sCRC) coding regions to screen loss of function (LoF) mutation genes, and carried out systems-level approaches to confirm top rank gene in this study.

resultsWe identified loss of BMP5 is an early event in CRC. Deep sequencing identified BMP5 was mutated in 7.7% (8/104) of sCRC samples, with 37.5% truncating mutation frequency. Notably, BMP5 negative expression and its prognostic value is uniquely significant in sCRC but not in other tumor types. Furthermore, BMP5 expression was positively correlated with E-cadherin in CRC patients and its dysregulation play a vital role in epithelial-mesenchymal transition (EMT), thus triggering tumor initiation and development. RNA sequencing identified, independent of BMP/Smads pathway, BMP5 signaled though Jak-Stat pathways to inhibit the activation of oncogene EPSTI1.

conclusionsOur result support a novel concept that the importance of BMP5 in sCRC. The tumor suppressor role of BMP5 highlights its crucial role in CRC initiation and development.

Indexed as

Bone Morphogenetic Protein 5Cell Line, TumorColorectal NeoplasmsEpithelial-Mesenchymal TransitionGene Expression ProfilingHCT116 CellsHT29 CellsHumansMutationSignal TransductionSmad ProteinsTranscriptomeTumor Suppressor ProteinsBMP5 protein, humanBone Morphogenetic Protein 5Smad ProteinsTumor Suppressor ProteinsBMP5Driver geneLoss of function mutationSporadic colorectal cancerTumor suppressor

Identifiers

PMID30572883
PMCPMC6302470

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.