Evidence map›Paper›PMID 30570804›Full record

ArticleThe Plant journal : for cell and molecular biology2019

ICE1 and ZOU determine the depth of primary seed dormancy in Arabidopsis independently of their role in endosperm development.

Dana R MacGregor, Naichao Zhang, Mayumi Iwasaki, Min Chen, Anuja Dave, Luis Lopez-Molina, Steven Penfield

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Plants (Basel, Switzerland) · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Endosperm Persistence inPlants (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Dana R MacGregorDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-0543-0408
Naichao ZhangDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0002-8644-0423
Mayumi IwasakiDepartment of Plant Biology and Institute for Genetics and Genomics in Geneva (iGE3), University of Geneva, 30, Quai Ernest-Ansermet CH-1211, Geneva, 4, Switzerland.ORCID 0000-0001-6561-4247
Min ChenDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-3294-9248
Anuja DaveDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-1003-9403
Luis Lopez-MolinaDepartment of Plant Biology and Institute for Genetics and Genomics in Geneva (iGE3), University of Geneva, 30, Quai Ernest-Ansermet CH-1211, Geneva, 4, Switzerland.ORCID 0000-0003-0463-1187
Steven PenfieldDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0001-6340-1731
John Innes Centre · GBUniversity of Geneva · CH

Funding

Biotechnology and Biological Sciences Research Council BB/L003198/2Biotechnology and Biological Sciences Research Council BBS/OS/CP/000001Swiss National Science Foundation 31003A_152660
6 · The paper itself

Abstract

Seed dormancy is a widespread and key adaptive trait that is essential for the establishment of soil seed banks and prevention of pre-harvest sprouting. Herein we demonstrate that the endosperm-expressed transcription factors ZHOUPI (ZOU) and INDUCER OF CBF EXPRESSION1 (ICE1) play a role in determining the depth of primary dormancy in Arabidopsis. We show that ice1 or zou increases seed dormancy and the double mutant has an additive phenotype. This increased dormancy is associated with increased ABA levels, and can be separated genetically from any role in endosperm maturation because loss of ABA biosynthesis or DELAY OF GERMINATION 1 reverses the dormancy phenotype without affecting the aberrant seed morphology. Consistent with these results, ice1 endosperms had an increased capacity for preventing embryo greening, a phenotype previously associated with an increase in endospermic ABA levels. Although ice1 changes the expression of many genes, including some in ABA biosynthesis, catabolism and/or signalling, only ABA INSENSITIVE 3 is significantly misregulated in ice1 mutants. We also demonstrate that ICE1 binds to and inhibits expression of ABA INSENSITIVE 3. Our data demonstrate that Arabidopsis ICE1 and ZOU determine the depth of primary dormancy during maturation independently of their effect on endosperm development.

Indexed as

Abscisic AcidArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsEndospermGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantGerminationPhenotypePlant DormancyPlant Growth RegulatorsSeedlingsSeedsSignal TransductionTranscription FactorsABI3 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsDOG1 protein, ArabidopsisICE1 protein, ArabidopsisPlant Growth RegulatorsRETARDED GROWTH OF EMBRYO1 protein, ArabidopsisTranscription FactorsABAABI3endosperm consumptionICE1primary dormancyseed developmentZOU

Identifiers

PMID30570804
PMCPMC6900779
OpenAlexW2906165673

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.