Evidence map›Paper›PMID 30569503›Full record

ArticleJournal of cellular physiology2019

Pharmacoinformatics and molecular docking reveal potential drug candidates against Schizophrenia to target TAAR6.

Rana Adnan Tahir, Hao Wu, Naima Javed, Anila Khalique, Seemab Amjad Fateh Khan, Asif Mir, Muhammad Saad Ahmed, George E Barreto, Hong Qing, Ghulam Md Ashraf and 1 more

Abstract read
In one paragraph

Article in Journal of cellular physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 6 countries.

Rana Adnan TahirKey Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Sciences, Beijing Institute of Technology, Beijing, China.ORCID 0000-0002-2738-7132
Hao WuState Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.
Naima JavedDepartment of Biosciences, COMSATS University Islamabad, Sahiwal Campus, Islamabad, Pakistan.
Anila KhaliqueState Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Bioactive Materials of Ministry of Education, College of Life Sciences, Nankai University, Tianjin, China.
Seemab Amjad Fateh KhanPharmacy Department, Novomed Hospital, Dubai, UAE.
Asif MirDepartment of Bioinformatics and Biotechnology, International Islamic University Islamabad, Islamabad, Pakistan.
Muhammad Saad AhmedDepartment of Biological Engineering/Institute of Biotransformation and Synthetic Biosystem, School of Life Sciences, Beijing Institute of Technology, Beijing, China.
George E BarretoDepartamento de Nutrición y Bioquímica, Facultad de Ciencias, Pontificia Universidad Javeriana, Bogotá, Colombia.ORCID 0000-0002-6644-1971
Hong QingKey Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Sciences, Beijing Institute of Technology, Beijing, China.
Ghulam Md AshrafKing Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
Sheikh Arslan SehgalState Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.ORCID 0000-0002-3901-5344
Beijing Institute of Technology · CNCOMSATS University Islamabad · PKChinese Academy of Sciences · CNInternational Islamic University, Islamabad · PKKing Abdulaziz University · SANankai University · CNPontificia Universidad Javeriana · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schizophrenia (SZ) is a complex disabling disorder that leads to the mental disability and afflicts 1% of the world's total population and placed in top ten medical disorders. In current work, bioinformatics analyses were carried out on Trace amine (TA)-associated receptor 6 (TAAR6) to recognize the potential drugs and compounds against SZ. Comparative modeling and threading-based approaches were utilized for the structure prediction of TAAR6. Fifty-nine predicted structures were evaluated by various model assessment techniques and final model having only eight amino acids in the outlier region and 98.5% overall quality factor was chosen for further pharmacoinformatics and molecular docking analyses. From an extensive literature review, 11 Food and Drug Administration (FDA) approved drugs were analyzed by computational techniques and Aripiprazole was found as the most effective drug against SZ by targeting TAAR6. Here, we report five novel molecules which exhibited the highest binding affinity, effective drug properties, and interestingly, observed better results than the approved selected drugs against SZ by targeting TAAR6. The docking analyses revealed that Arg-92, Trp-98, Gln-191, Thr-192, Ala-290, Cys-291, Tyr-293, and Glu-294 residues were observed as critical interacting residues in receptor-ligand interactions. Absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties, Lipinski rule of five, highest binding affinity coupled with virtual screening (VS), and pharmacophore modeling approach illustrated that aripiprazole (-8.6 kcal/mol) and TAAR6_0094 (-9.3 kcal/mol) are potential inhibitors for targeting TAAR6. It is suggested that schizophrenic patients have to use Aripiprazole for the medication of SZ by targeting TAAR6 and develop effective therapies by utilizing scrutinized novel compound.

Indexed as

SchizophreniaAntipsychotic AgentsAripiprazoleCell Cycle ProteinsComputational BiologyDrug DesignHumansMolecular Docking SimulationProtein ConformationReceptors, G-Protein-CoupledTrace Amine-Associated ReceptorsAntipsychotic AgentsAripiprazoleCell Cycle ProteinsReceptors, G-Protein-CoupledTAAR6 protein, humanTrace Amine-Associated Receptorsin silicomolecular dockingpharmacoinformaticsschizophrenia (SZ)trace amine-associated receptor 6 (TAAR6)trace amines (TAs)virtual screening (VS)

Identifiers

PMID30569503
PMCPMC13483300
OpenAlexW2906622577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.