Evidence map›Paper›PMID 30568167›Full record

ArticleNature communications2018

Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy.

Young-Jun Park, Kaitlyn D Lacourse, Christian Cambillau, Frank DiMaio, Joseph D Mougous, David Veesler

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. The Lord of the Rings: Cysteine bonds crosslink the tail of siphovirus.Protein science : a publication of the Protein Society · 2026
    Article
  2. Article
  3. Crystal structure of the type VI secretion system adaptor protein Tla3 from Pseudomonas aeruginosa.Acta crystallographica. Section F, Structural biology communications · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. TseCurrent research in microbial sciences · 2026
    Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Type VI secretion systems promote intraspecific competition and host interactions in a bee gut symbiont.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. The role of type VI secretion system genes in antibiotic resistance and virulence inFrontiers in cellular and infection microbiology · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. The type-VI secretion system of the beneficial symbiontMicrobiology (Reading, England) · 2023
    Review
  19. Uncovering the Secretion Systems ofAntibiotics (Basel, Switzerland) · 2023
    Review
  20. Activity and Crystal Structure of the Adherent-InvasiveInternational journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Young-Jun ParkDepartment of Biochemistry, University of Washington, Seattle, WA, 98195, USA.
Kaitlyn D LacourseDepartment of Microbiology, University of Washington, Seattle, WA, 98195, USA.ORCID http://orcid.org/0000-0002-6194-4553
Christian CambillauArchitecture et Fonction des Macromolecules Biologiques, Aix-Marseille Universite, CNRS, Campus de Luminy, Case 932, 13288, Marseille, Cedex 09, France.ORCID http://orcid.org/0000-0001-5502-4729
Frank DiMaioDepartment of Biochemistry, University of Washington, Seattle, WA, 98195, USA.
Joseph D MougousDepartment of Microbiology, University of Washington, Seattle, WA, 98195, USA.
David VeeslerDepartment of Biochemistry, University of Washington, Seattle, WA, 98195, USA. dveesler@uw.edu.

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Type VI secretion effectors and interbacterial competition in vivoR01AI080609 · NIAID · YALE UNIVERSITY · PI MOUGOUS, JOSEPH DAVID · 2009 to 2025
$6.7M
Protein structure determination from low-resolution experimental dataR01GM123089 · NIGMS · UNIVERSITY OF WASHINGTON · PI DIMAIO, FRANK P · 2017 to 2025
$2.6M
NIAID NIH HHS HHSN272201700059CNIAID NIH HHS R01 AI080609NIGMS NIH HHS R01 GM123089NIGMS NIH HHS T32 GM007270
6 · The paper itself

Abstract

Type VI secretion systems (T6SSs) translocate effectors into target cells and are made of a contractile sheath and a tube docked onto a multi-protein transmembrane complex via a baseplate. Although some information is available about the mechanisms of tail contraction leading to effector delivery, the detailed architecture and function of the baseplate remain unknown. Here, we report the 3.7 Å resolution cryo-electron microscopy reconstruction of an enteroaggregative Escherichia coli baseplate subcomplex assembled from TssK, TssF and TssG. The structure reveals two TssK trimers interact with a locally pseudo-3-fold symmetrical complex comprising two copies of TssF and one copy of TssG. TssF and TssG are structurally related to each other and to components of the phage T4 baseplate and of the type IV secretion system, strengthening the evolutionary relationships among these macromolecular machines. These results, together with bacterial two-hybrid assays, provide a structural framework to understand the T6SS baseplate architecture.

Indexed as

Amino Acid SequenceCryoelectron MicroscopyEscherichia coliEscherichia coli ProteinsProtein Structure, QuaternaryType VI Secretion SystemsEscherichia coli ProteinsTssF protein, E coliTssG protein, E coliTssK protein, E coliType VI Secretion Systems

Identifiers

PMID30568167
PMCPMC6300606

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.