Evidence map›Paper›PMID 30568031›Full record

ArticleJCI insight2018

Human kidney on a chip assessment of polymyxin antibiotic nephrotoxicity.

Elijah J Weber, Kevin A Lidberg, Lu Wang, Theo K Bammler, James W MacDonald, Mavis J Li, Michelle Redhair, William M Atkins, Cecilia Tran, Kelly M Hines and 9 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Molecular mechanisms attributed to colistin renal proximal tubular epithelial cytotoxicity.Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2025
    Review
  6. Review
  7. Article
  8. Frontiers in pharmacology · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Identification of prognostic biomarkers for antibiotic associated nephrotoxicity in cystic fibrosis.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 3 countries.

Elijah J WeberDepartment of Pharmaceutics.
Kevin A LidbergDepartment of Pharmaceutics.
Lu WangDepartment of Environmental and Occupational Health Sciences, and.
Theo K BammlerDepartment of Environmental and Occupational Health Sciences, and.
James W MacDonaldDepartment of Environmental and Occupational Health Sciences, and.
Mavis J LiDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
Michelle RedhairDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
William M AtkinsDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
Cecilia TranDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
Kelly M HinesDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
Josi HerronDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
Libin XuDepartment of Medicinal Chemistry, University of Washington, Seattle, Washington, USA.
Maria Beatriz MonteiroLaboratory of Systems Pharmacology, Harvard Program in Therapeutic Science, Harvard Medical School, Boston, Massachusetts, USA.
Susanne RammLaboratory of Systems Pharmacology, Harvard Program in Therapeutic Science, Harvard Medical School, Boston, Massachusetts, USA.
Vishal VaidyaLaboratory of Systems Pharmacology, Harvard Program in Therapeutic Science, Harvard Medical School, Boston, Massachusetts, USA.
Martti VaaraNorthern Antibiotics Ltd., Espoo, Finland.
Timo VaaraNorthern Antibiotics Ltd., Espoo, Finland.
Jonathan HimmelfarbDepartment of Medicine, Division of Nephrology, Kidney Research Institute, Seattle, Washington, USA.
Edward J KellyDepartment of Pharmaceutics.
University of Washington · USAmerican Pharmacists Association · USHarvard University · USNorthwest Kidney Centers · USUniversity of Helsinki · FI

Funding

XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Sheela Sathyanarayana · 1995 to 2026
$42.5M
Pharmacological Sciences SupplementT32GM007750 · NIGMS · UNIVERSITY OF WASHINGTON · PI ATKINS, WILLIAM M · 1985 to 2023
$12.6M
Environmetal Pathology/Toxicology Training ProgramT32ES007032 · NIEHS · UNIVERSITY OF WASHINGTON · PI FAUSTMAN, ELAINE M, ROSENFELD, MICHAEL E · 1985 to 2023
$10.7M
Using iPSCs to model patient outcomes in nephrotic syndromeUH3TR000504 · NCATS · UNIVERSITY OF WASHINGTON · PI HIMMELFARB, JONATHAN · 2014 to 2016
$6.1M
A Microphysiological System for Kidney Disease Modeling and Drug Efficacy TestingUG3TR002158 · NCATS · UNIVERSITY OF WASHINGTON · PI HIMMELFARB, JONATHAN · 2017 to 2018
$2.9M
A Tissue Engineered Human Kidney Microphysiological SystemUH2TR000504 · NCATS · UNIVERSITY OF WASHINGTON · PI HIMMELFARB, JONATHAN · 2012 to 2013
$2.1M
Oxysterols in SLOS Neurodevelopment: Pathological Role and TherapyR01HD092659 · NICHD · UNIVERSITY OF WASHINGTON · PI XU, LIBIN · 2017 to 2021
$1.9M
NCATS NIH HHS UG3 TR002158NCATS NIH HHS UH2 TR000504NCATS NIH HHS UH3 TR000504NICHD NIH HHS R01 HD092659NIEHS NIH HHS P30 ES007033NIEHS NIH HHS T32 ES007032NIGMS NIH HHS T32 GM007750
6 · The paper itself

Abstract

Drug-induced kidney injury, largely caused by proximal tubular intoxicants, limits development and clinical use of new and approved drugs. Assessing preclinical nephrotoxicity relies on animal models that are frequently insensitive; thus, potentially novel techniques - including human microphysiological systems, or "organs on chips" - are proposed to accelerate drug development and predict safety. Polymyxins are potent antibiotics against multidrug-resistant microorganisms; however, clinical use remains restricted because of high risk of nephrotoxicity and limited understanding of toxicological mechanisms. To mitigate risks, structural analogs of polymyxins (NAB739 and NAB741) are currently in clinical development. Using a microphysiological system to model human kidney proximal tubule, we exposed cells to polymyxin B (PMB) and observed significant increases of injury signals, including kidney injury molecule-1 KIM-1and a panel of injury-associated miRNAs (each P < 0.001). Surprisingly, transcriptional profiling identified cholesterol biosynthesis as the primary cellular pathway induced by PMB (P = 1.22 ×10-16), and effluent cholesterol concentrations were significantly increased after exposure (P < 0.01). Additionally, we observed no upregulation of the nuclear factor (erythroid derived-2)-like 2 pathway, despite this being a common pathway upregulated in response to proximal tubule toxicants. In contrast with PMB exposure, minimal changes in gene expression, injury biomarkers, and cholesterol concentrations were observed in response to NAB739 and NAB741. Our findings demonstrate the preclinical safety of NAB739 and NAB741 and reveal cholesterol biosynthesis as a potentially novel pathway for PMB-induced injury. To our knowledge, this is the first demonstration of a human-on-chip platform used for simultaneous safety testing of new chemical entities and defining unique toxicological pathway responses of an FDA-approved molecule.

Indexed as

Acute Kidney InjuryAnimalsAnti-Bacterial AgentsBiomarkersDehydrocholesterolsDesmosterolDisease Models, AnimalGene ExpressionHeme Oxygenase-1Hepatitis A Virus Cellular Receptor 1HumansKidneyKidney Tubules, ProximalLanosterolNF-E2-Related Factor 2Polymyxin B7-dehydrocholesterolAnti-Bacterial AgentsBiomarkersDehydrocholesterolsDesmosterolHAVCR1 protein, humanHeme Oxygenase-1Hepatitis A Virus Cellular Receptor 1HMOX1 protein, humanLanosterolNAB 739 peptideNAB741NF-E2-Related Factor 2Polymyxin BPolymyxinsCell stressNephrologyToxicologyToxins/drugs/xenobiotics

Identifiers

PMID30568031
PMCPMC6338315
OpenAlexW2905499843

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.