Evidence map›Paper›PMID 30567931›Full record

ArticleDevelopment (Cambridge, England)2019

Reproducibility and staging of 3D human retinal organoids across multiple pluripotent stem cell lines.

Elizabeth E Capowski, Kayvan Samimi, Steven J Mayerl, M Joseph Phillips, Isabel Pinilla, Sara E Howden, Jishnu Saha, Alex D Jansen, Kimberly L Edwards, Lindsey D Jager and 10 more

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 221 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
221citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

221 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Advances in vascularized organoids.Chinese medical journal · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. New developments and applications of human organoids.Nature reviews. Molecular cell biology · 2026
    Review
  10. Neuroinflammation in glaucoma: a myriad of cellular pathways and players.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. A cell fate specification and transition mechanism for human foveolar cone subtype patterning.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  19. Article
  20. Article

161 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Elizabeth E CapowskiWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Kayvan SamimiMorgridge Institute for Research, University of Wisconsin-Madison, Madison, WI 53706, USA.
Steven J MayerlWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
M Joseph PhillipsWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Isabel PinillaAragon Institute for Health Research (IIS Aragón), Lozano Blesa University Hospital, Zaragoza 50009, Spain.
Sara E HowdenMurdoch Children's Research Institute, The Royal Children's Hospital, Parkville, Victoria 3052, Australia.
Jishnu SahaWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.ORCID 0000-0002-4502-6402
Alex D JansenWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Kimberly L EdwardsWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Lindsey D JagerWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Katherine BarlowWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Rasa ValiaugaWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Zachary ErlichmanWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.ORCID 0000-0003-3154-4281
Anna HagstromWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Divya SinhaWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA.
Valentin M SluchDepartment of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0003-3318-7986
Xitiz ChamlingDepartment of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Donald J ZackDepartment of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Melissa C SkalaMorgridge Institute for Research, University of Wisconsin-Madison, Madison, WI 53706, USA.
David M GammWaisman Center, University of Wisconsin-Madison, Madison, WI 53705, USA dgamm@wisc.edu.ORCID 0000-0002-8152-613X

Funding

BIOCHEMISTRY, CELLULAR AND MOLECULAR BIOLOGY PROGRAMT32GM007445 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GREEN, RACHEL · 1985 to 2021
$24.1M
Waisman Intellectual and Developmental Disabilities Research Center Down Syndrome RegistryU54HD090256 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI CHANG, QIANG · 2016 to 2020
$6.0M
Mechanisms of Retinogenesis in Human Stem CellsR01EY021218 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI GAMM, DAVID M · 2010 to 2017
$2.2M
An Upright Multiphoton Microscopy System to Support the Biomedical SciencesS10OD025040 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 2018 to 2018
$597k
NEI NIH HHS R01 EY021218NICHD NIH HHS U54 HD090256NIGMS NIH HHS T32 GM007445NIH HHS S10 OD025040
6 · The paper itself

Abstract

Numerous protocols have been described for producing neural retina from human pluripotent stem cells (hPSCs), many of which are based on the culture of 3D organoids. Although nearly all such methods yield at least partial segments of retinal structure with a mature appearance, variabilities exist within and between organoids that can change over a protracted time course of differentiation. Adding to this complexity are potential differences in the composition and configuration of retinal organoids when viewed across multiple differentiations and hPSC lines. In an effort to understand better the current capabilities and limitations of these cultures, we generated retinal organoids from 16 hPSC lines and monitored their appearance and structural organization over time by light microscopy, immunocytochemistry, metabolic imaging and electron microscopy. We also employed optical coherence tomography and 3D imaging techniques to assess and compare whole or broad regions of organoids to avoid selection bias. Results from this study led to the development of a practical staging system to reduce inconsistencies in retinal organoid cultures and increase rigor when utilizing them in developmental studies, disease modeling and transplantation.

Indexed as

Cell DifferentiationCell LineCell ProliferationCell ShapeEpendymoglial CellsHumansInterneuronsModels, BiologicalNeural Stem CellsOrganoidsPluripotent Stem CellsReproducibility of ResultsRetinaRetinal Ganglion CellsSynapsesTomography, Optical CoherenceCell cultureDifferentiationHuman pluripotent stem cellsOrganoidsPhotoreceptorsRetina

Identifiers

PMID30567931
PMCPMC6340149

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.