Evidence map›Paper›PMID 30565091›Full record

ArticleCell stress & chaperones2019

Transcriptomic profiles of muscle, heart, and spleen in reaction to circadian heat stress in Ethiopian highland and lowland male chicken.

Marinus F W Te Pas, Woncheoul Park, Krishnamoorthy Srikanth, Steve Kemp, Jun-Mo Kim, Dajeong Lim, Jong-Eun Park

Open access · hybridAbstract read
In one paragraph

Article in Cell stress & chaperones, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Regulating appetite in broilers for improving body and muscle development - A review.Journal of animal physiology and animal nutrition · 2020
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Marinus F W Te PasWageningen UR Livestock Research, Animal Breeding and Genomics, Wageningen, The Netherlands. Marinus.tepas@wur.nl.ORCID http://orcid.org/0000-0001-8849-3011
Woncheoul ParkDepartment of Animal Biotechnology and Environment, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea.
Krishnamoorthy SrikanthDepartment of Animal Biotechnology and Environment, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea.
Steve KempAnimal Biosciences, International Livestock Research Institute (ILRI), Nairobi, Kenya.
Jun-Mo KimDepartment of Animal Science and Technology, Chung-Ang University, Anseong, Gyeonggi-do, 17546, Republic of Korea.
Dajeong LimDepartment of Animal Biotechnology and Environment, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea.
Jong-Eun ParkDepartment of Animal Biotechnology and Environment, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea. jepark0105@korea.kr.
Rural Development Administration · KRChung-Ang University · KRInternational Livestock Research Institute · KEWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Temperature stress impacts both welfare and productivity of livestock. Global warming is expected to increase the impact, especially in tropical areas. We investigated the biological mechanisms regulated by temperature stress due to the circadian temperature cycle in temperature adapted and non-adapted chicken under tropical conditions. We studied transcriptome profiles of heart, breast muscle, and spleen tissues of Ethiopian lowland chicken adapted to high circadian temperatures and non-adapted Ethiopian highland chicken under lowland conditions at three points during the day: morning, noon, and evening. Functional annotations and network analyses of genes differentially expressed among the time points of the day indicate major differences in the reactions of the tissues to increasing and decreasing temperatures, and also the two chickens lines differ. However, epigenetic changes of chromatin methylation and histone (de)acetylation seemed to be central regulatory mechanisms in all tissues in both chicken lines. Finally, all tissues showed differentially expressed genes between morning and evening times indicating biological mechanisms that need to change during the night to reach morning levels again the next day.

Indexed as

TranscriptomeAnimalsChickensCircadian RhythmEthiopiaHeat-Shock ResponseMaleMolecular Sequence AnnotationMusclesMyocardiumSpleenBreast muscle—meatHeartHeat stressHighland and lowland male chickenSpleenTranscriptome profiles

Identifiers

PMID30565091
PMCPMC6363629
OpenAlexW2903991410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.