Evidence map›Paper›PMID 30563462›Full record

ArticleBMC plant biology2018

Anthocyanin accumulation correlates with hormones in the fruit skin of 'Red Delicious' and its four generation bud sport mutants.

Wen-Fang Li, Juan Mao, Shi-Jin Yang, Zhi-Gang Guo, Zong-Huan Ma, Mohammed Mujitaba Dawuda, Cun-Wu Zuo, Ming-Yu Chu, Bai-Hong Chen

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 94 citations in OpenAlex.

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  15. International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Wen-Fang LiCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Juan MaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Shi-Jin YangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Zhi-Gang GuoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Zong-Huan MaCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Mohammed Mujitaba DawudaCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Cun-Wu ZuoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Ming-Yu ChuCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Bai-Hong ChenCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China. bhch@gsau.edu.cn.ORCID http://orcid.org/0000-0002-6963-1279
Gansu Agricultural University · CN

Funding

Discipline Construction Fund Project of Gansu Agricultural University GSAU-XKJS-2018-230Fostering Foundation for the Excellent Ph.D. Dissertation of Gansu Agricultural University 2017002Science and Technology Major Project of Gansu Province 18ZD2NA006
6 · The paper itself

Abstract

backgroundBud sport mutants of apple (Malus domestica Borkh.) trees with a highly blushed colouring pattern are mainly caused by the accumulation of anthocyanins in the fruit skin. Hormones are important factors modulating anthocyanin accumulation. However, a good understanding of the interplay between hormones and anthocyanin synthesis in apples, especially in mutants at the molecular level, remains elusive. Here, physiological and comparative transcriptome approaches were used to reveal the molecular basis of color pigmentation in the skin of 'Red Delicious' (G0) and its mutants, including 'Starking Red' (G1), 'Starkrimson' (G2), 'Campbell Redchief' (G3) and 'Vallee spur' (G4).

resultsPigmentation in the skin gradually proliferated from G0 to G4. The anthocyanin content was higher in the mutants than in 'Red Delicious'. The activation of early phenylpropanoid biosynthesis genes, including ASP3, PAL, 4CL, PER, CHS, CYP98A and F3'H, was more responsible for anthocyanin accumulation in mutants at the color break stage. In addition, IAA and ABA had a positive regulatory effect on the synthesis of anthocyanins, while GA had the reverse effect. The down-regulation of AACT1, HMGS, HMGR, MVK, MVD2, IDI1 and FPPS2 involved in terpenoid biosynthesis influences anthocyanin accumulation by positively regulating transcripts of AUX1 and SAUR that contribute to the synthesis of IAA, GID2 to GA, PP2C and SnRK2 to ABA. Furthermore, MYB and bHLH members, which are highly correlated (r=0.882-0.980) with anthocyanin content, modulated anthocyanin accumulation by regulating the transcription of structural genes, including CHS and F3'H, involved in the flavonoid biosynthesis pathway.

conclusionsThe present comprehensive transcriptome analyses contribute to the understanding of the the relationship between hormones and anthocyanin synthesis as well as the molecular mechanism involved in apple skin pigmentation.

Indexed as

AnthocyaninsFlavonoidsFruitGene Expression ProfilingGene Expression Regulation, PlantMalusMutationPigmentationPlant Growth RegulatorsPlant ProteinsTerpenesTranscription FactorsAnthocyaninsFlavonoidsPlant Growth RegulatorsPlant ProteinsTerpenesTranscription FactorsAppleBud sportFruit skinHormonePigmentationRNA-seq

Identifiers

PMID30563462
PMCPMC6299587
OpenAlexW2903698580

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.