Evidence map›Paper›PMID 30563222›Full record

ArticleInternational journal of molecular sciences2018

Defining a Characteristic Gene Expression Set Responsible for Cancer Stem Cell-Like Features in a Sub-Population of Ewing Sarcoma Cells CADO-ES1.

Marc Hotfilder, Nikhil Mallela, Jochen Seggewiß, Uta Dirksen, Eberhard Korsching

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Ro 08-2750 increases radiation-induced cytotoxicity in DLBCL by dysregulating the DNA damage response.Strahlentherapie und Onkologie : Organ der Deutschen Rontgengesellschaft ... [et al] · 2026
    Article
  2. Article
  3. CD44 Modulates Cell Migration and Invasion in Ewing Sarcoma Cells.International journal of molecular sciences · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marc HotfilderDepartment of Pediatric Hematology and Oncology, University Hospital Münster, 48149 Münster, Germany. marc.hotfilder@ukmuenster.de.
Nikhil MallelaInstitute of Bioinformatics, Faculty of Medicine, University of Münster, 48149 Münster, Germany. nikhil.vinod2006@gmail.com.
Jochen SeggewißInstitute of Human Genetics, Faculty of Medicine, University of Münster, 48149 Münster, Germany. jochen.seggewiss@ukmuenster.de.
Uta DirksenUniversity Hospital Essen, Pediatrics III, Hematology and Oncology, West German Cancer Centre, 45147 Essen, Germany. uta.dirksen@uk-essen.de.
Eberhard KorschingInstitute of Bioinformatics, Faculty of Medicine, University of Münster, 48149 Münster, Germany. eberhard.korsching@uni-muenster.de.ORCID 0000-0001-9141-1988

Funding

Federal Ministry of Education and Research BMBF 01GM0869 TranSaRNetFederal Ministry of Education and Research BMBF 01KT1310 European Transcan I, PROVABESOpen Access Publication Fund of the University of Münster OA01
6 · The paper itself

Abstract

One of the still open questions in Ewing sarcoma, a rare bone tumor with weak therapeutic options, is to identify the tumor-driving cell (sub) population and to understand the specifics in the biological network of these cells. This basic scientific insight might foster the development of more specific therapeutic target patterns. The experimental approach is based on a side population (SP) of Ewing cells, based on the model cell line CADO-ES1. The SP is established by flow cytometry and defined by the idea that tumor stem-like cells can be identified by the time-course in clearing a given artificial dye. The SP was characterized by a higher colony forming activity, by a higher differentiation potential, by higher resistance to cytotoxic drugs, and by morphology. Several SP and non-SP cell fractions and bone marrow-derived mesenchymal stem cell reference were analyzed by short read sequencing of the full transcriptome. The double-differential analysis leads to an altered expression structure of SP cells centered around the AP-1 and APC/c complex. The SP cells share only a limited proportion of the full mesenchymal stem cell stemness set of genes. This is in line with the expectation that tumor stem-like cells share only a limited subset of stemness features which are relevant for tumor survival.

Indexed as

Bone NeoplasmsCell DifferentiationCell Line, TumorCell ProliferationDrug Resistance, NeoplasmEpigenesis, GeneticFlow CytometryGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansNeoplastic Stem CellsSarcoma, EwingSequence Analysis, RNASide-Population CellsAP-1APC/ccancer stem cellsEwing sarcomagene expressionmesenchymal stem cellsside populationtumor driver cells

Identifiers

PMID30563222
PMCPMC6321634

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.