Evidence map›Paper›PMID 30562600›Full record

ArticleRegulatory toxicology and pharmacology : RTP2019

Principles and procedures for handling out-of-domain and indeterminate results as part of ICH M7 recommended (Q)SAR analyses.

Alexander Amberg, Roxanne V Andaya, Lennart T Anger, Chris Barber, Lisa Beilke, Joel Bercu, Dave Bower, Alessandro Brigo, Zoryanna Cammerer, Kevin P Cross and 34 more

Abstract read
In one paragraph

Article in Regulatory toxicology and pharmacology : RTP, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Implementation ofComputational toxicology (Amsterdam, Netherlands) · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors.

Alexander AmbergSanofi, R&D Preclinical Safety Frankfurt, Industriepark Hoechst, D-65926, Frankfurt am Main, Germany.
Roxanne V AndayaGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Lennart T AngerSanofi, R&D Preclinical Safety Frankfurt, Industriepark Hoechst, D-65926, Frankfurt am Main, Germany.
Chris BarberLhasa Limited, Leeds, UK.
Lisa BeilkeToxicology Solutions Inc., San Diego, CA, USA.
Joel BercuGilead Sciences, 333 Lakeside Drive, Foster City, CA, USA.
Dave BowerLeadscope, Inc., 1393 Dublin Rd, Columbus, OH, 43215, USA.
Alessandro BrigoRoche Pharmaceutical Research & Early Development, Pharmaceutical Sciences, Roche Innovation Center Basel, Switzerland.
Zoryanna CammererJanssen Research & Development, 1400 McKean Road, Spring House, PA, 19477, USA.
Kevin P CrossLeadscope, Inc., 1393 Dublin Rd, Columbus, OH, 43215, USA.
Laura CusterBristol-Myers Squibb, Drug Safety Evaluation, 1 Squibb Dr, New Brunswick, NJ, 08903, USA.
Krista DoboPfizer Global Research & Development, 558 Eastern Point Road, Groton, CT, 06340, USA.
Helga GeretsUCB Biopharma SPRL, Chemin du Foriest, B-1420, Braine-l'Alleud, Belgium.
Véronique GervaisServier Group, Gidy, France.
Susanne GlowienkeNovartis Pharma AG, Pre-Clinical Safety, Werk Klybeck, CH-4057, Basel, Switzerland.
Stephen GomezConsultant to Theravance Biopharma US, Inc., 901 Gateway Blvd, South San Francisco, CA, 94080, USA.
Jacky Van GompelJanssen Pharmaceutical Companies of Johnson & Johnson, 2340, Beerse, Belgium.
James HarveyGlaxoSmithKline, Park Road, Ware, Hertfordshire, SG12 0DP, UK.
Catrin HasselgrenGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Masamitsu HonmaNational Institute of Health Sciences, Tokyo, Japan.
Candice JohnsonLeadscope, Inc., 1393 Dublin Rd, Columbus, OH, 43215, USA.
Robert JollyToxicology Division, Eli Lilly and Company, Indianapolis, IN, USA.
Raymond KemperVertex Pharmaceuticals Inc., Discovery and Investigative Toxicology, 50 Northern Ave, Boston, MA, USA.
Michelle KenyonPfizer Global Research & Development, 558 Eastern Point Road, Groton, CT, 06340, USA.
Naomi KruhlakFDA Center for Drug Evaluation and Research, Silver Spring, MD, USA.
Penny LeavittBristol-Myers Squibb, Drug Safety Evaluation, 1 Squibb Dr, New Brunswick, NJ, 08903, USA.
Scott MillerLeadscope, Inc., 1393 Dublin Rd, Columbus, OH, 43215, USA.
Wolfgang MusterRoche Pharmaceutical Research & Early Development, Pharmaceutical Sciences, Roche Innovation Center Basel, Switzerland.
Russell NavenTakeda, Cambridge, MA, USA.
John NicoletteAbbVie Inc., North Chicago, IL, USA.
Alexis ParentyNovartis Pharma AG, Pre-Clinical Safety, Werk Klybeck, CH-4057, Basel, Switzerland.
Mark PowleyMerck Research Laboratories, West Point, PA, 19486, USA.
Donald P QuigleyLeadscope, Inc., 1393 Dublin Rd, Columbus, OH, 43215, USA.
M Vijayaraj ReddyMerck Research Laboratories, West Point, PA, 19486, USA.
Jennifer C SasakiGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Lidiya StavitskayaFDA Center for Drug Evaluation and Research, Silver Spring, MD, USA.
Andrew TeasdaleAstraZeneca, Macclesfield, Cheshire, UK.
Alejandra Trejo-MartinGilead Sciences, 333 Lakeside Drive, Foster City, CA, USA.
Sandy WeinerJanssen Research & Development, 1400 McKean Road, Spring House, PA, 19477, USA.
Dennie S WelchAbbVie Inc., North Chicago, IL, USA.
Angela WhiteGlaxoSmithKline, Park Road, Ware, Hertfordshire, SG12 0DP, UK.
Joerg WichardBayer Pharma AG, Investigational Toxicology, Muellerstr. 178, D-13353, Berlin, Germany.
David WoolleyForthTox Limited, PO Box 13550, Linlithgow, EH49 7YU, UK.
Glenn J MyattLeadscope, Inc., 1393 Dublin Rd, Columbus, OH, 43215, USA. Electronic address: gmyatt@leadscope.com.

Funding

Rapid response toxicology prediction platformR44ES026909 · NIEHS · LEADSCOPE, INC. · PI MYATT, GLENN JOHN · 2018 to 2019
$1000k
NIEHS NIH HHS R44 ES026909
6 · The paper itself

Abstract

The International Council for Harmonization (ICH) M7 guideline describes a hazard assessment process for impurities that have the potential to be present in a drug substance or drug product. In the absence of adequate experimental bacterial mutagenicity data, (Q)SAR analysis may be used as a test to predict impurities' DNA reactive (mutagenic) potential. However, in certain situations, (Q)SAR software is unable to generate a positive or negative prediction either because of conflicting information or because the impurity is outside the applicability domain of the model. Such results present challenges in generating an overall mutagenicity prediction and highlight the importance of performing a thorough expert review. The following paper reviews pharmaceutical and regulatory experiences handling such situations. The paper also presents an analysis of proprietary data to help understand the likelihood of misclassifying a mutagenic impurity as non-mutagenic based on different combinations of (Q)SAR results. This information may be taken into consideration when supporting the (Q)SAR results with an expert review, especially when out-of-domain results are generated during a (Q)SAR evaluation.

Indexed as

Drug ContaminationGuidelines as TopicQuantitative Structure-Activity RelationshipDrug IndustryGovernment AgenciesMutagensRisk AssessmentMutagens

Identifiers

PMID30562600
PMCPMC7500704

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.