Evidence map›Paper›PMID 30561792›Full record

ArticleFEBS letters2019

Symmetrical organization of proteins under docked synaptic vesicles.

Xia Li, Abhijith Radhakrishnan, Kirill Grushin, Ravikiran Kasula, Arunima Chaudhuri, Sujatha Gomathinayagam, Shyam S Krishnakumar, Jun Liu, James E Rothman

Abstract read
In one paragraph

Article in FEBS letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Mechanisms of SNARE proteins in membrane fusion.Nature reviews. Molecular cell biology · 2024
    Review
  11. Synaptophysin chaperones the assembly of 12 SNAREpins under each ready-release vesicle.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Diacylglycerol-dependent hexamers of the SNARE-assembling chaperone Munc13-1 cooperatively bind vesicles.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. SNARE Proteins in Synaptic Vesicle Fusion.Advances in neurobiology · 2023
    Article
  14. Synaptotagmin rings as high-sensitivity regulators of synaptic vesicle docking and fusion.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. In situ architecture of the lipid transport protein VPS13C at ER-lysosome membrane contacts.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Symmetrical arrangement of proteins under release-ready vesicles in presynaptic terminals.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Nascent fusion pore opening monitored at single-SNAREpin resolution.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xia LiDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT, USA.
Abhijith RadhakrishnanDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Kirill GrushinDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Ravikiran KasulaDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Arunima ChaudhuriDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Sujatha GomathinayagamDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Shyam S KrishnakumarDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Jun LiuDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT, USA.
James E RothmanDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.

Funding

Regulation of Membrane Fusion in ExocytosisR01DK027044 · NIDDK · YALE UNIVERSITY · PI KRISHNAKUMAR, SHYAM S · 1986 to 2021
$8.2M
MECHANISMS OF INTRACELLULAR MEMBRANE FUSIONR37DK027044 · NIDDK · YALE UNIVERSITY · PI ROTHMAN, JAMES · 1992 to 2012
$5.3M
Structural basis of signaling between bacterial chemoreceptors and flagellaR01GM107629 · NIGMS · YALE UNIVERSITY · PI LIU, JUN · 2014 to 2017
$1.5M
NIDDK NIH HHS R01 DK027044NIDDK NIH HHS R37 DK027044NIGMS NIH HHS R01 GM107629
6 · The paper itself

Abstract

During calcium-regulated exocytosis, the constitutive fusion machinery is 'clamped' in a partially assembled state until synchronously released by calcium. The protein machinery involved in this process is known, but the supra-molecular architecture and underlying mechanisms are unclear. Here, we use cryo-electron tomography analysis in nerve growth factor-differentiated neuro-endocrine (PC12) cells to delineate the organization of the release machinery under the docked vesicles. We find that exactly six exocytosis modules, each likely consisting of a single SNAREpin with its bound Synaptotagmins, Complexin, and Munc18 proteins, are symmetrically arranged at the vesicle-PM interface. Mutational analysis suggests that the symmetrical organization is templated by circular oligomers of Synaptotagmin. The observed arrangement, including its precise radial positioning, is in-line with the recently proposed 'buttressed ring hypothesis'.

Indexed as

AnimalsCalciumCryoelectron MicroscopyElectron Microscope TomographyExocytosisMunc18 ProteinsMutationNerve Growth FactorNerve Tissue ProteinsNeuritesPC12 CellsRatsSNARE ProteinsSynaptic VesiclesSynaptotagminsCalciumMunc18 ProteinsNerve Growth FactorNerve Tissue ProteinsSNARE ProteinsSynaptotagminscryo-electron tomographyPC12 cellsregulated exocytosisSNARE proteinssynaptotagmin

Identifiers

PMID30561792
PMCPMC6353562

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.