ArticleNature biotechnology2019
Minimum Information about an Uncultivated Virus Genome (MIUViG).
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Article in Nature biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 459 papers, 2 of them syntheses that pooled it.
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459citing papers in PubMed, 2 pooled it
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Who cites it
459 citing papers in PubMed, 2 syntheses or guidelines pooled it.
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- The Human Vaginal Virome: Composition, Microbiome Interactions, and Implications for Bacterial Vaginosis, HPV Persistence, and Preterm Birth.Microorganisms · 2026Review
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- Genomic catalogue of giant viruses reveals expanded diversity and functional potential.Nature microbiology · 2026Article
- Characterization of microbial dark matter at scale with MetaSBT and taxonomy-aware Sequence Bloom Trees.Nature biotechnology · 2026Article
- Elevation-structured viral ecological strategies along glacier-fed rivers on the Qinghai-Tibet Plateau.Nature communications · 2026Article
- Article
- Hawaiian geothermal fumaroles contain diverse and novel viruses.Microbiology spectrum · 2026Article
- ViralQC: a tool for assessing completeness and contamination of predicted viral contigs.Bioinformatics (Oxford, England) · 2026Article
399 more citing papers are in PubMed but not listed here.
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Authors and funding
61 authors.
Simon RouxUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.ORCID 0000-0002-5831-5895
Evelien M AdriaenssensInstitute of Integrative Biology, University of Liverpool, Liverpool, UK.ORCID 0000-0003-4826-5406
Bas E DutilhTheoretical Biology and Bioinformatics, Utrecht University, Utrecht, the Netherlands.ORCID 0000-0003-2329-7890
Eugene V KooninNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA.
Andrew M KropinskiDepartment of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, Ontario, Canada.
Mart KrupovicInstitut Pasteur, Unité Biologie Moléculaire du Gène chez les Extrêmophiles, Paris, France.ORCID 0000-0001-5486-0098
Jens H KuhnIntegrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Fort Detrick, Frederick, Maryland, USA.
Rob LavigneKU Leuven, Laboratory of Gene Technology, Heverlee, Belgium.
J Rodney BristerNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA.
Arvind VarsaniBiodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State University, Tempe, Arizona, USA.ORCID 0000-0003-4111-2415
Clara AmidEuropean Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Ramy K AzizDepartment of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Cairo, Egypt.
Seth R BordensteinDepartments of Biological Sciences and Pathology, Microbiology, and Immunology, Vanderbilt Institute for Infection, Immunology and Inflammation, Vanderbilt Genetics Institute, Vanderbilt University, Nashville, Tennessee, USA.ORCID 0000-0001-7346-0954
Peer BorkEuropean Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0002-2627-833X
Mya BreitbartCollege of Marine Science, University of South Florida, Saint Petersburg, Florida, USA.
Guy R CochraneEuropean Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Rebecca A DalySoil and Crop Sciences Department, Colorado State University, Fort Collins, Colorado, USA.
Christelle DesnuesAix-Marseille Université, CNRS, MEPHI, IHU Méditerranée Infection, Marseille, France.
Melissa B DuhaimeDepartment of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA.
Joanne B EmersonUniversity of California, Davis, Department of Plant Pathology, Davis, California, USA.
François EnaultLMGE,UMR 6023 CNRS, Université Clermont Auvergne, Aubiére, France.
Jed A FuhrmanUniversity of Southern California, Los Angeles, Los Angeles, California, USA.ORCID 0000-0002-2361-1985
Pascal HingampAix Marseille Université, Université de Toulon, CNRS, IRD, MIO UM 110, Marseille, France.
Philip HugenholtzAustralian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, Queensland, Australia.ORCID 0000-0001-5386-7925
Bonnie L HurwitzDepartment of Agricultural and Biosystems Engineering, University of Arizona, Tucson, Arizona, USA.
Natalia N IvanovaUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.ORCID 0000-0002-5802-9485
Jessica M LabontéDepartment of Marine Biology, Texas A&M University at Galveston, Galveston, Texas, USA.
Kyung-Bum LeeDDBJ Center, National Institute of Genetics, Mishima, Shizuoka, Japan.
Rex R MalmstromUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Manuel Martinez-GarciaDepartment of Physiology, Genetics and Microbiology, University of Alicante, Alicante, Spain.
Ilene Karsch MizrachiNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA.
Hiroyuki OgataInstitute for Chemical Research, Kyoto University, Uji, Japan.
David Páez-EspinoUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.ORCID 0000-0002-2939-5398
Marie-Agnès PetitMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France.ORCID 0000-0003-2242-2768
Catherine PutontiDepartment of Biology, Loyola University Chicago, Chicago, Illinois, USA.
Thomas RatteiDivision of Computational Systems Biology, Department of Microbiology and Ecosystem Science, Research Network "Chemistry Meets Microbiology," University of Vienna, Vienna, Austria.ORCID 0000-0002-0592-7791
Alejandro ReyesMax Planck Tandem Group in Computational Biology, Department of Biological Sciences, Universidad de los Andes, Bogotá, Colombia.
Francisco Rodriguez-ValeraEvolutionary Genomics Group, Departamento de Producción Vegetal y Microbiología, Universidad Miguel Hernández, Alicante, Spain.ORCID 0000-0002-9809-2059
Karyna RosarioCollege of Marine Science, University of South Florida, Saint Petersburg, Florida, USA.ORCID 0000-0001-9847-4113
Lynn SchrimlUniversity of Maryland School of Medicine, Baltimore, Maryland, USA.
Frederik SchulzUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.ORCID 0000-0002-4932-4677
Grieg F StewardCenter for Microbial Oceanography: Research and Education, Department of Oceanography, University of Hawai'i at Manoa, Honolulu, Hawai'i, USA.
Matthew B SullivanDepartment of Microbiology, The Ohio State University, Columbus, Ohio, USA.
Shinichi SunagawaETH Zurich, Department of Biology, Zurich, Switzerland.ORCID 0000-0003-3065-0314
Curtis A SuttleDepartment of Earth, Ocean and Atmospheric Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Ben TempertonSchool of Biosciences, University of Exeter, Exeter, UK.ORCID 0000-0002-3667-8302
Susannah G TringeUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.ORCID 0000-0001-6479-8427
Rebecca Vega ThurberDepartment of Microbiology, Oregon State University, Oregon, USA.
Nicole S WebsterAustralian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, Queensland, Australia.ORCID 0000-0002-4753-5278
Katrine L WhitesonDepartment of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.ORCID 0000-0002-5356-0111
Steven W WilhelmDepartment of Microbiology, University of Tennessee, Knoxville, Tennessee, USA.ORCID 0000-0001-6283-8077
K Eric WommackUniversity of Delaware, Delaware Biotechnology Institute, Newark, Delaware, USA.
Tanja WoykeUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.ORCID 0000-0002-9485-5637
Kelly C WrightonSoil and Crop Sciences Department, Colorado State University, Fort Collins, Colorado, USA.ORCID 0000-0003-0434-4217
Pelin YilmazMicrobial Physiology Group, Max Planck Institute for Marine Microbiology, Bremen, Germany.ORCID 0000-0003-4724-323X
Takashi YoshidaGraduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwake, Kyoto, Japan.
Mark J YoungDepartment of Plant Sciences and Plant Pathology, Montana State University, Bozeman, Montana, USA.
Natalya YutinNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA.
Lisa Zeigler AllenJ Craig Venter Institute, La Jolla, California, USA.
Nikos C KyrpidesUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Emiley A Eloe-FadroshUS Department of Energy Joint Genome Institute, Walnut Creek, California, USA.
Funding
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9MThe Genetic Basis of Cytoplasmic IncompatibilityR01AI132581 · NIAID · VANDERBILT UNIVERSITY · PI BORDENSTEIN, SETH R · 2017 to 2021
$2.0MUnderstanding the Healthy Gut Virome and its Role in Human HealthR01GM117361 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI DE VOS, WILLEM M., YOUNG, MARK J · 2016 to 2019
$1.1MWolbachia Genes That Mediate Cytoplasmic IncompatibilityR21HD086833 · NICHD · VANDERBILT UNIVERSITY · PI BORDENSTEIN, SETH R · 2016 to 2017
$432kNIAID NIH HHS HHSN272200700016INIAID NIH HHS R01 AI132581NICHD NIH HHS R21 HD086833NIDDK NIH HHS P30 DK058404NIGMS NIH HHS R01 GM117361
Abstract
We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genomic Standards Consortium framework and include virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction. Community-wide adoption of MIUViG standards, which complement the Minimum Information about a Single Amplified Genome (MISAG) and Metagenome-Assembled Genome (MIMAG) standards for uncultivated bacteria and archaea, will improve the reporting of uncultivated virus genomes in public databases. In turn, this should enable more robust comparative studies and a systematic exploration of the global virosphere.
Indexed as
Genome, ViralVirus CultivationDatabases, GeneticGenomicsViruses
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