Evidence map›Paper›PMID 30554379›Full record

ArticleFolia microbiologica2019

Melanoma-related changes in skin microbiome.

Jakub Mrázek, Chahrazed Mekadim, Petra Kučerová, Roman Švejstil, Hana Salmonová, Jitka Vlasáková, Renata Tarasová, Jana Čížková, Monika Červinková

Abstract read
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In one paragraph

Article in Folia microbiologica, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jakub MrázekInstitute of Animal Physiology and Genetics of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic. mrazek@iapg.cas.cz.ORCID http://orcid.org/0000-0003-1907-3333
Chahrazed MekadimInstitute of Animal Physiology and Genetics of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.
Petra KučerováInstitute of Animal Physiology and Genetics of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.
Roman ŠvejstilFaculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, Kamýcká 129, Prague 6 - Suchdol, 165 00, Prague, Czech Republic.
Hana SalmonováFaculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, Kamýcká 129, Prague 6 - Suchdol, 165 00, Prague, Czech Republic.
Jitka VlasákováFaculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, Kamýcká 129, Prague 6 - Suchdol, 165 00, Prague, Czech Republic.
Renata TarasováFaculty of Biomedical Engineering, Czech Technical University in Prague, Nám. Sítná 3105, 272 01, Kladno, Czech Republic.
Jana ČížkováFaculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, Kamýcká 129, Prague 6 - Suchdol, 165 00, Prague, Czech Republic.
Monika ČervinkováInstitute of Animal Physiology and Genetics of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.

Funding

Fakultu Agrobiologie, Potravinových a Prírodních Zdroju, Ceská Zemedelská Univerzita v Praze CIGA 20162001Fakultu Agrobiologie, Potravinových a Prírodních Zdroju, Ceská Zemedelská Univerzita v Praze CIGA 20162019Ministerstvo Školství, Mládeže a Telovýchovy CZ.02.1.01/0.0/0.0/15_003/0000460Ministerstvo Školství, Mládeže a Telovýchovy LO1609
6 · The paper itself

Abstract

Melanoma is the least common form of skin tumor, but it is potentially the most dangerous and responsible for the majority of skin cancer deaths. We suggest that the skin microbiome might be changed during the progression of melanoma. The aim of this study is to compare the composition of the skin microbiota between different locations (skin and melanoma) of a MeLiM (Melanoma-bearing Libechov Minipig) pig model (exophytic melanoma). Ninety samples were used for PCR-DGGE analysis with primers specifically targeting the V3 region of the 16S rRNA gene. The profiles were used for cluster analysis by UPGMA and principal coordinate analysis PCoA and also to calculate the diversity index (Simpson index of diversity). By comparing the obtained results, we found that both bacterial composition and diversity were significantly different between the skin and melanoma microbiomes. The abundances of Fusobacterium and Trueperella genera were significantly increased in melanoma samples, suggesting a strong relationship between melanoma development and skin microbiome changes.

Indexed as

MicrobiotaAnimalsBacteriaDisease Models, AnimalDNA, BacterialDNA PrimersFusobacteriumGenetic VariationMelanomaRNA, Ribosomal, 16SSequence Analysis, DNASkinSwineSwine, MiniatureDNA, BacterialDNA PrimersRNA, Ribosomal, 16S

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.