Evidence map›Paper›PMID 30552799›Full record

ArticlePlant biotechnology journal2019

NF-YB1-YC12-bHLH144 complex directly activates Wx to regulate grain quality in rice (Oryza sativa L.).

Babatunde Kazeem Bello, Yuxuan Hou, Juan Zhao, Guiai Jiao, Yawen Wu, Zhiyong Li, Yifeng Wang, Xiaohong Tong, Wei Wang, Wenya Yuan and 2 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed.

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  16. Life (Basel, Switzerland) · 2025
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  19. Creating a SuperiorFoods (Basel, Switzerland) · 2025
    Article
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33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Babatunde Kazeem BelloState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Yuxuan HouState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Juan ZhaoState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Guiai JiaoState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Yawen WuState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Zhiyong LiState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Yifeng WangState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Xiaohong TongState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Wei WangState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Wenya YuanState Key Lab of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-Resources, Hubei Key Laboratory of Industrial Biotechnology, College of Life Sciences, Hubei University, Wuhan, China.
Xiangjin WeiState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.
Jian ZhangState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou, China.ORCID 0000-0003-2804-0162

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of seed development regulatory genes is the key for the genetic improvement in rice grain quality. NF-Ys are the important transcription factors, but their roles in rice grain quality control and the underlying molecular mechanism remain largely unknown. Here, we report the functional characterization a rice NF-Y heterotrimer complex NF-YB1-YC12-bHLH144, which is formed by the binding of NF-YB1 to NF-YC12 and then bHLH144 in a sequential order. Knock-out of each of the complex genes resulted in alteration of grain qualities in all the mutants as well as reduced grain size in crnf-yb1 and crnf-yc12. RNA-seq analysis identified 1496 genes that were commonly regulated by NF-YB1 and NF-YC12, including the key granule-bound starch synthase gene Wx. NF-YC12 and bHLH144 maintain NF-YB1 stability from the degradation mediated by ubiquitin/26S proteasome, while NF-YB1 directly binds to the 'G-box' domain of Wx promoter and activates Wx transcription, hence to regulate rice grain quality. Finally, we revealed a novel grain quality regulatory pathway controlled by NF-YB1-YC12-bHLH144 complex, which has great potential for rice genetic improvement.

Indexed as

Gene Expression Regulation, PlantBasic Helix-Loop-Helix ProteinsEdible GrainOryzaPlant ProteinsSeedsStarch SynthaseBasic Helix-Loop-Helix ProteinsPlant ProteinsStarch SynthaseG-boxgrain qualityheterotrimer complexnuclear factor Yrice (Oryza sativa L.)Wx gene

Identifiers

PMID30552799
PMCPMC6576074

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.