Evidence map›Paper›PMID 30548837›Full record

ArticleMicrobiologyOpen2019

Genome sequence of Methylocystis hirsuta CSC1, a polyhydroxyalkanoate producing methanotroph.

Sergio Bordel, Elisa Rodríguez, Raúl Muñoz

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sergio BordelDepartamento de Ingeniería Química y Tecnología del Medio Ambiente, Escuela de Ingenierías Industriales, Universidad de Valladolid, Valladolid, Spain.ORCID 0000-0001-6162-6478
Elisa RodríguezDepartamento de Ingeniería Química y Tecnología del Medio Ambiente, Escuela de Ingenierías Industriales, Universidad de Valladolid, Valladolid, Spain.
Raúl MuñozDepartamento de Ingeniería Química y Tecnología del Medio Ambiente, Escuela de Ingenierías Industriales, Universidad de Valladolid, Valladolid, Spain.
Universidad de Valladolid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyhydroxyalkanoates (PHAs) are biodegradable plastics that can be produced by some methanotrophic organisms such as those of the genus Methylocystis. This allows the conversion of a detrimental greenhouse gas into an environmentally friendly high added-value bioproduct. This study presents the genome sequence of Methylocystis hirsuta CSC1 (a high yield PHB producer). The genome comprises 4,213,043 bp in 4 contigs, with the largest contig being 3,776,027 bp long. Two of the other contigs are likely to correspond to large size plasmids. A total of 4,664 coding sequences were annotated, revealing a PHA production cluster, two distinct particulate methane monooxygenases with active catalytic sites, as well as a nitrogen fixation operon and a partial denitrification pathway.

Indexed as

Genome, BacterialBacterial ProteinsBase SequenceMethaneMethylocystaceaeOxygenasesPlasmidsPolyhydroxyalkanoatesBacterial ProteinsMethanemethane monooxygenaseOxygenasesPolyhydroxyalkanoatesgenomemethane monooxygenasesmethanotrophsmethylocystispolyhydroxyalkanoates

Identifiers

PMID30548837
PMCPMC6562138
OpenAlexW2904085461

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.