Evidence map›Paper›PMID 30547805›Full record

ArticleBMC systems biology2018

A hotspots analysis-relation discovery representation model for revealing diabetes mellitus and obesity.

Guannan He, Yanchun Liang, Yan Chen, William Yang, Jun S Liu, Mary Qu Yang, Renchu Guan

Open access · diamondAbstract read
In one paragraph

Article in BMC systems biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Guannan HeKey Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, College of Computer Science and Technology, Jilin University, Changchun, 130012, China.
Yanchun LiangKey Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, College of Computer Science and Technology, Jilin University, Changchun, 130012, China.
Yan ChenDepartment of Endocrinology, The Second Hospital of Jilin University, Changchun, 130000, China.
William YangDepartment of Computer Science, Carnegie Mellon University, Pittsburgh, PA, 15213, USA.
Jun S LiuDepartment of Statistics, Harvard University, Cambridge, MA, 02138, USA.
Mary Qu YangMidSouth Bioinformatics Center and Joint Bioinformatics Ph.D, Program of University of Arkansas at Little Rock and Univ. of Arkansas Medical Sciences, 2801 S. Univ. Ave, Little Rock, 72204, USA.
Renchu GuanKey Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, College of Computer Science and Technology, Jilin University, Changchun, 130012, China. guanrenchu@jlu.edu.cn.
Jilin University · CNCarnegie Mellon University · USHarvard University · USSecond Affiliated Hospital of Jilin University · CNUniversity of Arkansas at Little Rock · USUniversity of Arkansas for Medical Sciences · US

Funding

Developing integrative approaches for identifying disease-causing genes and dysfunctional networksR15GM114739 · NIGMS · UNIVERSITY OF ARKANSAS AT LITTLE ROCK · PI YANG, MARY · 2015 to 2015
$374k
NIGMS NIH HHS R15 GM114739
6 · The paper itself

Abstract

backgroundNowadays, because of the huge economic burden on society causing by obesity and diabetes, they turn into the most serious public health challenges in the world. To reveal the close and complex relationships between diabetes, obesity and other diseases, search the effective treatment for them, a novel model named as representative latent Dirichlet allocation (RLDA) topic model is presented.

resultsRLDA was applied to a corpus of more than 337,000 literatures of diabetes and obesity which were published from 2007 to 2016. To unveil those meaningful relationships between diabetes mellitus, obesity and other diseases, we performed an explicit analysis on the output of our model with a series of visualization tools. Then, with the clinical reports which were not used in the training data to show the credibility of our discoveries, we find that a sufficient number of these records are matched directly. Our results illustrate that in the last 10 years, for obesity accompanying diseases, scientists and researchers mainly focus on 17 of them, such as asthma, gastric disease, heart disease and so on; for the study of diabetes mellitus, it features a more broad scope of 26 diseases, such as Alzheimer's disease, heart disease and so forth; for both of them, there are 15 accompanying diseases, listed as following: adrenal disease, anxiety, cardiovascular disease, depression, heart disease, hepatitis, hypertension, hypothalamic disease, respiratory disease, myocardial infarction, OSAS, liver disease, lung disease, schizophrenia, tuberculosis. In addition, tumor necrosis factor, tumor, adolescent obesity or diabetes, inflammation, hypertension and cell are going be the hot topics related to diabetes mellitus and obesity in the next few years.

conclusionsWith the help of RLDA, the hotspots analysis-relation discovery results on diabetes and obesity were achieved. We extracted the significant relationships between them and other diseases such as Alzheimer's disease, heart disease and tumor. It is believed that the new proposed representation learning algorithm can help biomedical researchers better focus their attention and optimize their research direction.

Indexed as

Diabetes ComplicationsAlgorithmsComputational BiologyObesityPubMedDiabetes mellitusObesityRepresentative latent Dirichlet allocation

Identifiers

PMID30547805
PMCPMC6293500
OpenAlexW2904603273

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.