Evidence map›Paper›PMID 30547308›Full record

ArticleJournal of the American Society for Mass Spectrometry2019

Development of Novel Free Radical Initiated Peptide Sequencing Reagent: Application to Identification and Characterization of Peptides by Mass Spectrometry.

Kaylee Gaspar, Kimberly Fabijanczuk, Tara Otegui, Jose Acosta, Jinshan Gao

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Improved Performance of Positive-Ion Mode Free Radical-Initiated Peptide Sequencing withJournal of the American Society for Mass Spectrometry · 2023
    Article
  4. Free Radical-Based Sequencing for Native Top-Down Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2022
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kaylee GasparDepartment of Chemistry and Biochemistry, Center for Quantitative Obesity Research, Montclair State University, 1 Normal Avenue, Montclair, NJ, 07043, USA.
Kimberly FabijanczukDepartment of Chemistry and Biochemistry, Center for Quantitative Obesity Research, Montclair State University, 1 Normal Avenue, Montclair, NJ, 07043, USA.
Tara OteguiDepartment of Chemistry and Biochemistry, Center for Quantitative Obesity Research, Montclair State University, 1 Normal Avenue, Montclair, NJ, 07043, USA.
Jose AcostaDepartment of Chemistry and Biochemistry, Center for Quantitative Obesity Research, Montclair State University, 1 Normal Avenue, Montclair, NJ, 07043, USA.
Jinshan GaoDepartment of Chemistry and Biochemistry, Center for Quantitative Obesity Research, Montclair State University, 1 Normal Avenue, Montclair, NJ, 07043, USA. gaoj@montclair.edu.ORCID http://orcid.org/0000-0001-9363-785X
Montclair State University · US

Funding

Characterization and enrichment of glycoprotein/glycan via multi-functional free radical reagentsR15GM121986 · NIGMS · MONTCLAIR STATE UNIVERSITY · PI GAO, JINSHAN · 2017 to 2017
$357k
National Institutes of Health 1R15GM121986-01A1National Science Foundation 1709272NIGMS NIH HHS R15 GM121986
6 · The paper itself

Abstract

By incorporating a high proton affinity moiety to the charge localized free radical-initiated peptide sequencing (CL-FRIPS) reagent, FRIPS-MS technique has extended the applicability to hydrophobic peptides and peptides without basic amino acid residues (lysine, arginine, and histidine). Herein, the CL-FRIPS reagent has three moieties: (1) pyridine acting as the basic site to locate the proton, (2) 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO, a stable free radical) acting as the free radical precursor to generate the nascent free radical in the gas phase, and (3) N-hydroxysuccinimide (NHS) activated carboxylic acid acting as the coupling site to derivatize the N-terminus of peptides. The CL-FRIPS reagent allows for the characterization of peptides by generating sequencing ions, enzymatic cleavage-like radical-induced side chain losses, and the loss of TEMPO simultaneously via one-step collisional activation. Further collisional activation of enzymatic cleavage-like radical-induced side chain loss ions provides more information for the structure determination of peptides. The application of CL-FRIPS reagent to characterize peptides is proved by employing bovine insulin as the model peptide. Both scaffold structure of bovine insulin and sequencing information of each chain are achieved. Graphical Abstract.

Indexed as

Amyloid beta-PeptidesAnimalsCattleFree RadicalsIndicators and ReagentsInsulinPeptidesSpectrometry, Mass, Electrospray IonizationAmyloid beta-PeptidesFree RadicalsIndicators and ReagentsInsulinPeptidesCharge localizeFree radicalHydrophobic peptidesInsulinPeptide sequencingPeptides without basic amino acid residues

Identifiers

PMID30547308
PMCPMC6417990
OpenAlexW2905303572

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.