Evidence map›Paper›PMID 30547240›Full record

ArticlePlanta2019

Mining the natural genetic variation in Arabidopsis thaliana for adaptation to sequential abiotic and biotic stresses.

Silvia Coolen, Johan A Van Pelt, Saskia C M Van Wees, Corné M J Pieterse

Abstract read
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In one paragraph

Article in Planta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Ozone-Induced Biochemical and Molecular Changes inAntioxidants (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Identification of genetic loci in lettuce mediating quantitative resistance to fungal pathogens.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. ABA-Dependent Salt Stress Tolerance AttenuatesFrontiers in plant science · 2020
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Silvia CoolenPlant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, PO Box 80056, 3508 TB, Utrecht, The Netherlands.
Johan A Van PeltPlant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, PO Box 80056, 3508 TB, Utrecht, The Netherlands.
Saskia C M Van WeesPlant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, PO Box 80056, 3508 TB, Utrecht, The Netherlands.
Corné M J PietersePlant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, PO Box 80056, 3508 TB, Utrecht, The Netherlands. C.M.J.Pieterse@uu.nl.

Funding

Stichting voor de Technische Wetenschappen STW10988
6 · The paper itself

Abstract

MAIN

conclusionIn this genome-wide association study, we obtained novel insights into the genetic basis of the effect of herbivory or drought stress on the level of resistance against the fungus Botrytis cinerea. In nature, plants function in complex environments where they encounter different biotic and abiotic stresses individually, sequentially or simultaneously. The adaptive response to a single stress does not always reflect how plants respond to such a stress in combination with other stresses. To identify genetic factors that contribute to the plant's ability to swiftly adapt to different stresses, we investigated the response of Arabidopsis thaliana to infection by the necrotrophic fungus B. cinerea when preceded by Pieris rapae herbivory or drought stress. Using 346 natural A. thaliana accessions, we found natural genetic variation in the level of resistance against single B. cinerea infection. When preceded by herbivory or drought stress, the level of B. cinerea resistance was differentially influenced in the 346 accessions. To study the genetic factors contributing to the differential adaptation of A. thaliana to B. cinerea infection under multi-stress conditions, we performed a genome-wide association study supported by quantitative trait loci mapping and fine mapping with full genome sequences of 164 accessions. This yielded several genes previously associated with defense to B. cinerea and additional candidate genes with putative roles in the plant's adaptive response to a combination of herbivory, drought and B. cinerea infection.

Indexed as

Adaptation, PhysiologicalAnimalsArabidopsisBotrytisButterfliesChromosome MappingDisease ResistanceGenetic VariationGenome-Wide Association StudyHerbivoryLarvaPlant DiseasesQuantitative Trait LociStress, PhysiologicalBotrytis cinereaDrought stressGenome-wide association (GWA) mappingMulti-stress resistancePieris rapaeQuantitative trait loci (QTL) mapping

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.