Evidence map›Paper›PMID 30545805›Full record

ArticleJMIR public health and surveillance2018

Where No Universal Health Care Identifier Exists: Comparison and Determination of the Utility of Score-Based Persons Matching Algorithms Using Demographic Data.

Anthony Waruru, Agnes Natukunda, Lilly M Nyagah, Timothy A Kellogg, Emily Zielinski-Gutierrez, Wanjiru Waruiru, Kenneth Masamaro, Richelle Harklerode, Jacob Odhiambo, Eric-Jan Manders and 1 more

Abstract read
In one paragraph

Article in JMIR public health and surveillance, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Anthony WaruruDivision of Global HIV and TB, Centers for Disease Control and Prevention, Nairobi, Kenya.ORCID http://orcid.org/0000-0002-4281-6345
Agnes NatukundaGlobal Programs for Research and Training, University of California San Francisco, San Francisco, CA, United States.ORCID http://orcid.org/0000-0003-1156-201X
Lilly M NyagahNational AIDS and STI Control Program, Ministry of Health, Nairobi, Kenya.ORCID http://orcid.org/0000-0002-3852-6695
Timothy A KelloggInstitute for Global Health Sciences, University of California San Francisco, San Francisco, CA, United States.ORCID http://orcid.org/0000-0003-0142-6508
Emily Zielinski-GutierrezDivision of Global HIV and TB, Centers for Disease Control and Prevention, Nairobi, Kenya.ORCID http://orcid.org/0000-0002-8412-0979
Wanjiru WaruiruInstitute for Global Health Sciences, University of California San Francisco, San Francisco, CA, United States.ORCID http://orcid.org/0000-0002-8355-8004
Kenneth MasamaroDivision of Global HIV and TB, Centers for Disease Control and Prevention, Nairobi, Kenya.ORCID http://orcid.org/0000-0002-3790-9037
Richelle HarklerodeInstitute for Global Health Sciences, University of California San Francisco, San Francisco, CA, United States.ORCID http://orcid.org/0000-0001-7166-2325
Jacob OdhiamboThe Palladium Group, Nairobi, Kenya.ORCID http://orcid.org/0000-0002-4234-9740
Eric-Jan MandersDivision of Global HIV and TB, Centers for Disease Control and Prevention, Atlanta, GA, United States.ORCID http://orcid.org/0000-0001-6027-0457
Peter W YoungDivision of Global HIV and TB, Centers for Disease Control and Prevention, Nairobi, Kenya.ORCID http://orcid.org/0000-0002-7432-2876

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA universal health care identifier (UHID) facilitates the development of longitudinal medical records in health care settings where follow up and tracking of persons across health care sectors are needed. HIV case-based surveillance (CBS) entails longitudinal follow up of HIV cases from diagnosis, linkage to care and treatment, and is recommended for second generation HIV surveillance. In the absence of a UHID, records matching, linking, and deduplication may be done using score-based persons matching algorithms. We present a stepwise process of score-based persons matching algorithms based on demographic data to improve HIV CBS and other longitudinal data systems.

objectiveThe aim of this study is to compare deterministic and score-based persons matching algorithms in records linkage and matching using demographic data in settings without a UHID.

methodsWe used HIV CBS pilot data from 124 facilities in 2 high HIV-burden counties (Siaya and Kisumu) in western Kenya. For efficient processing, data were grouped into 3 scenarios within (1) HIV testing services (HTS), (2) HTS-care, and (3) within care. In deterministic matching, we directly compared identifiers and pseudo-identifiers from medical records to determine matches. We used R stringdist package for Jaro, Jaro-Winkler score-based matching and Levenshtein, and Damerau-Levenshtein string edit distance calculation methods. For the Jaro-Winkler method, we used a penalty (р)=0.1 and applied 4 weights (ω) to Levenshtein and Damerau-Levenshtein: deletion ω=0.8, insertion ω=0.8, substitutions ω=1, and transposition ω=0.5.

resultsWe abstracted 12,157 cases of which 4073/12,157 (33.5%) were from HTS, 1091/12,157 (9.0%) from HTS-care, and 6993/12,157 (57.5%) within care. Using the deterministic process 435/12,157 (3.6%) duplicate records were identified, yielding 96.4% (11,722/12,157) unique cases. Overall, of the score-based methods, Jaro-Winkler yielded the most duplicate records (686/12,157, 5.6%) while Jaro yielded the least duplicates (546/12,157, 4.5%), and Levenshtein and Damerau-Levenshtein yielded 4.6% (563/12,157) duplicates. Specifically, duplicate records yielded by method were: (1) Jaro 5.7% (234/4073) within HTS, 0.4% (4/1091) in HTS-care, and 4.4% (308/6993) within care, (2) Jaro-Winkler 7.4% (302/4073) within HTS, 0.5% (6/1091) in HTS-care, and 5.4% (378/6993) within care, (3) Levenshtein 6.4% (262/4073) within HTS, 0.4% (4/1091) in HTS-care, and 4.2% (297/6993) within care, and (4) Damerau-Levenshtein 6.4% (262/4073) within HTS, 0.4% (4/1091) in HTS-care, and 4.2% (297/6993) within care.

conclusionsWithout deduplication, over reporting occurs across the care and treatment cascade. Jaro-Winkler score-based matching performed the best in identifying matches. A pragmatic estimate of duplicates in health care settings can provide a corrective factor for modeled estimates, for targeting and program planning. We propose that even without a UHID, standard national deduplication and persons-matching algorithm that utilizes demographic data would improve accuracy in monitoring HIV care clinical cascades.

Indexed as

deterministic matchingHIV case-based surveillancescore-based matchingunique case identificationuniversal health care identifier

Identifiers

PMID30545805
PMCPMC6315226

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.