ArticleInternational journal of molecular sciences2018
Transcriptome Sequence Analysis Elaborates a Complex Defensive Mechanism of Grapevine (
Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
27 citing papers in PubMed.
- Article
- Genome-wide analysis of MYB transcription factor family and AsMYB1R subfamily contribution to ROS homeostasis regulation in Avena sativa under PEG-induced drought stress.BMC plant biology · 2024Article
- Transcriptome Profiling of a Salt Excluder Hybrid Grapevine Rootstock 'Ruggeri' throughout Salinity.Plants (Basel, Switzerland) · 2024Article
- Genome-wide association analysis for drought tolerance and associated traits in faba bean (Frontiers in plant science · 2023Article
- Grapevine (Vitis vinifera) responses to salt stress and alkali stress: transcriptional and metabolic profiling.BMC plant biology · 2022Article
- Coastal Wild Grapevine Accession (Plants (Basel, Switzerland) · 2022Article
- Genome-wide identification and expression analysis of magnesium transporter gene family in grape (Vitis vinifera).BMC plant biology · 2022Article
- How salt stress-responsive proteins regulate plant adaptation to saline conditions.Plant molecular biology · 2022Review
- Proteomics approach to investigating osmotic stress effects on pistachio.Frontiers in plant science · 2022Article
- Physiological and Transcriptional Responses to Saline Irrigation of Young 'Tempranillo' Vines Grafted Onto Different Rootstocks.Frontiers in plant science · 2022Article
- Regulation of Reactive Oxygen Species and Antioxidant Defense in Plants under Salinity.International journal of molecular sciences · 2021Review
- Transcriptomic Characterization of Nitrate-Enhanced Stevioside Glycoside Synthesis in Stevia (International journal of molecular sciences · 2021Article
- Every cloud has a silver lining: how abiotic stresses affect gene expression in plant-pathogen interactions.Journal of experimental botany · 2021Review
- IntegratedFrontiers in plant science · 2021Article
- Genome-Wide Identification and Expression Analysis ofFrontiers in genetics · 2021Article
- Significance of cytosolic cathepsin D in Alzheimer's disease pathology: Protective cellular effects of PLGA nanoparticles against β-amyloid-toxicity.Neuropathology and applied neurobiology · 2020Article
- Growth, physiological and transcriptomic analysis of the perennial ryegrassRoyal Society open science · 2020Article
- Genome-wide identification of the class III POD gene family and their expression profiling in grapevine (Vitis vinifera L).BMC genomics · 2020Article
- Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development.BMC plant biology · 2020Article
- Salt stress induces endoplasmic reticulum stress-responsive genes in a grapevine rootstock.PloS one · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
Abstract
Salinity is ubiquitous abiotic stress factor limiting viticulture productivity worldwide. However, the grapevine is vulnerable to salt stress, which severely affects growth and development of the vine. Hence, it is crucial to delve into the salt resistance mechanism and screen out salt-resistance prediction marker genes; we implicated RNA-sequence (RNA-seq) technology to compare the grapevine transcriptome profile to salt stress. Results showed 2472 differentially-expressed genes (DEGs) in total in salt-responsive grapevine leaves, including 1067 up-regulated and 1405 down-regulated DEGs. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotations suggested that many DEGs were involved in various defense-related biological pathways, including ROS scavenging, ion transportation, heat shock proteins (HSPs), pathogenesis-related proteins (PRs) and hormone signaling. Furthermore, many DEGs were encoded transcription factors (TFs) and essential regulatory proteins involved in signal transduction by regulating the salt resistance-related genes in grapevine. The antioxidant enzyme analysis showed that salt stress significantly affected the superoxide dismutase (SOD), peroxidase (POD), catalase (CAT) and glutathione S-transferase (GST) activities in grapevine leaves. Moreover, the uptake and distribution of sodium (Na⁺), potassium (K⁺) and chlorine (Cl
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.