Evidence map›Paper›PMID 30543901›Full record

ArticleThe Journal of investigative dermatology2019

A20 and ABIN1 Suppression of a Keratinocyte Inflammatory Program with a Shared Single-Cell Expression Signature in Diverse Human Rashes.

Paymann Harirchian, Jerry Lee, Stephanie Hilz, Andrew J Sedgewick, Bethany E Perez White, Michael J Kesling, Thaddeus Mully, Justin Golovato, Matthew Gray, Theodora M Mauro and 8 more

Abstract read
In one paragraph

Article in The Journal of investigative dermatology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Repressive Control of Keratinocyte Cytoplasmic Inflammatory Signaling.International journal of molecular sciences · 2023
    Review
  6. Review
  7. Decoding the Human Epidermal Complexity at Single-Cell Resolution.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Peripheral mechanisms of peripheral neuropathic pain.Frontiers in molecular neuroscience · 2023
    Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Paymann HarirchianDepartment of Dermatology, University of California, San Francisco and Veterans Affairs Medical Center, San Francisco, California, USA.
Jerry LeeDepartment of Dermatology, University of California, San Francisco and Veterans Affairs Medical Center, San Francisco, California, USA.
Stephanie HilzDepartment of Neurological Surgery, University of California, San Francisco, California.
Andrew J SedgewickNantomics, LLC, Culver City, California.
Bethany E Perez WhiteSkin Tissue Engineering Core and Department of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.
Michael J KeslingFreelance Bioinformatician, San Francisco, California.
Thaddeus MullyDepartment of Pathology, University of California, San Francisco, California.
Justin GolovatoNantomics, LLC, Culver City, California.
Matthew GrayNantomics, LLC, Culver City, California.
Theodora M MauroDepartment of Dermatology, University of California, San Francisco and Veterans Affairs Medical Center, San Francisco, California, USA.
Elizabeth PurdomDepartment of Statistics, University of California, Berkeley, California.
Esther A KimDepartment of Plastic Surgery, University of California, San Francisco, California.
Hani SbitanyDepartment of Plastic Surgery, University of California, San Francisco, California.
Tina BhutaniDepartment of Dermatology, University of California, San Francisco, California.
Charles J VaskeNantomics, LLC, Culver City, California.
Stephen C BenzNantomics, LLC, Culver City, California.
Raymond J ChoDepartment of Dermatology, University of California, San Francisco, California.
Jeffrey B ChengDepartment of Dermatology, University of California, San Francisco and Veterans Affairs Medical Center, San Francisco, California, USA. Electronic address: Jeffrey.cheng@ucsf.edu.

Funding

The Role of Keratinocytes as Independent ThermosensorsP30AR057216 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PALLER, AMY S · 2009 to 2018
$6.0M
Pathogenesis and Therapy of Ichthyosis in Disorders of Lipid MetabolismR01AR061106 · NIAMS · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI MAURO, THEODORA M · 2012 to 2022
$3.3M
ATP2A2-Regulated Keretinocyted Ca2+ Signaling MechanismsR01AR051930 · NIAMS · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI MAURO, THEODORA M · 2006 to 2019
$3.2M
Role of DNA Methylation and Hydroxymethylation in Epidermal HomeostasisK08AR067243 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHENG, JEFFREY B · 2015 to 2019
$834k
NIAMS NIH HHS K08 AR067243NIAMS NIH HHS P30 AR057216NIAMS NIH HHS R01 AR051930NIAMS NIH HHS R01 AR061106
6 · The paper itself

Abstract

Genetic variation in the NF-κB inhibitors, ABIN1 and A20, increase risk for psoriasis. While critical for hematopoietic immune cell function, these genes are believed to additionally inhibit psoriasis by dampening inflammatory signaling in keratinocytes. We dissected ABIN1 and A20's regulatory role in human keratinocyte inflammation using an RNA sequencing-based comparative genomic approach. Here we show subsets of the IL-17 and tumor necrosis factor-α signaling pathways are robustly restricted by A20 overexpression. In contrast, ABIN1 overexpression inhibits these genes more modestly for IL-17, and weakly for tumor necrosis factor-α. Our genome-scale analysis also indicates that inflammatory program suppression appears to be the major transcriptional influence of A20/ABIN1 overexpression, without obvious influence on keratinocyte viability genes. Our findings thus enable dissection of the differing anti-inflammatory mechanisms of two distinct psoriasis modifiers, which may be directly exploited for therapeutic purposes. Importantly, we report that IL-17-induced targets of A20 show similar aberrant epidermal layer-specific transcriptional upregulation in keratinocytes from diseases as diverse as psoriasis, atopic dermatitis, and erythrokeratodermia variabilis, suggesting a contributory role for epidermal inflammation in a broad spectrum of rashes.

Indexed as

Cells, CulturedDermatitis, AtopicDNA-Binding ProteinsErythrokeratodermia VariabilisExanthemaGenomicsHumansInterleukin-17KeratinocytesPrimary Cell CulturePsoriasisRNA-SeqSignal TransductionSingle-Cell AnalysisSkinTumor Necrosis Factor-alphaDNA-Binding ProteinsInterleukin-17TNFAIP3 protein, humanTNF protein, humanTNIP1 protein, humanTumor Necrosis Factor-alphaTumor Necrosis Factor alpha-Induced Protein 3

Identifiers

PMID30543901
PMCPMC6642632

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.