ArticleMicrobial genomics2018
Genome analysis provides insights into the epidemiology of infection with Flavobacterium psychrophilum among farmed salmonid fish in Sweden.
Article in Microbial genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.
What it found
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Who cites it
8 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Systematic review of the status of veterinary epidemiological research in two species regarding the FAIR guiding principles.BMC veterinary research · 2021Pooled it
- Phenotypic and Genotypic Antimicrobial Resistance Profiles of Flavobacterium psychrophilum and Flavobacterium branchiophilum Isolated From Rainbow Trout (Oncorhynchus mykiss) in Slovenia.Journal of fish diseases · 2025Article
- Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms.BMC microbiology · 2024Article
- Pangenome analysis provides insights into the genetic diversity, metabolic versatility, and evolution of the genusMicrobiology spectrum · 2023Article
- Characterization and Pathogenicity ofMicroorganisms · 2023Article
- Assessment of animal diseases caused by bacteria resistant to antimicrobials: kept fish species.EFSA journal. European Food Safety Authority · 2022Article
- Comparative genome analysis ofMicrobial genomics · 2020Article
- Phenotypic and Genetic Predictors of Pathogenicity and Virulence inFrontiers in microbiology · 2019Article
Corrections and comments
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The pathogen Flavobacterium psychrophilum is a major problem for the expanding salmonid fish farming industry in Sweden as well as worldwide. A better understanding of the phylogeography and infection routes of F. psychrophilum outbreaks could help to improve aquaculture profitability and the welfare of farmed fish while reducing the need for antibiotics. In the present study, high-throughput genome sequencing was applied to a collection of F. psychrophilum isolates (n=38) from outbreaks on fish farms in different regions of Sweden between 1988 and 2016. Antibiotic susceptibility tests were applied to a subset of the isolates and the results correlated to the presence of genetic resistance markers. We show that F. psychrophilum clones are not regionally biased and that new clones with a higher degree of antibiotic resistance have emerged nationwide during the study period. This supports previous theories of the importance of live fish and egg trade as a route of infection. Continuous monitoring of recovered isolates by high-throughput sequencing techniques in the future could facilitate tracing of clones within and between countries, as well as the detection of emergent virulent or antibiotic-resistant clones. This article contains data hosted by Microreact.
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